RNA–Protein interactions for RNA: YBR178W

YBR178W, Transcript of Dubious open reading frame, yeast

Gene YBR178W, Length 375 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR178W	YBR178W	PRM2	P40534	656 aa		0.66	□□□□□ -2.3
YBR178W	YBR178W	IZH1	Q03419	316 aa		0.66	□□□□□ -2.3
YBR178W	YBR178W	DIN7	Q12086	430 aa		0.66	□□□□□ -2.3
YBR178W	YBR178W	YLR112W	Q12130	139 aa		0.66	□□□□□ -2.3
YBR178W	YBR178W	SSF2	Q12153	453 aa	Predicted RBP	0.66	□□□□□ -2.3
YBR178W	YBR178W	MDM12	Q92328	271 aa		0.66	□□□□□ -2.3
YBR178W	YBR178W	CHO2	P05374	869 aa	Known RBP	0.65	□□□□□ -2.31
YBR178W	YBR178W	GAL11	P19659	1081 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	RPS2	P25443	254 aa	Known RBP	0.65	□□□□□ -2.31
YBR178W	YBR178W	RAD24	P32641	659 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	YKR075C	P36155	307 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.65	□□□□□ -2.31	not detected
YBR178W	YBR178W	EHT1	P38295	451 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	YJL193W	P39542	402 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	TPA1	P40032	644 aa	Known RBP	0.65	□□□□□ -2.31
YBR178W	YBR178W	SMK1	P41808	388 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	VPS25	P47142	202 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	YDL183C	P48569	320 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	TAF4	P50105	388 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	EAF7	P53911	425 aa	Known RBP	0.65	□□□□□ -2.31
YBR178W	YBR178W	RNY1	Q02933	434 aa	Known RBP	0.65	□□□□□ -2.31
YBR178W	YBR178W	NSE5	Q03718	556 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	CAC2	Q04199	468 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	ATG33	Q06485	197 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	AIM41	Q12032	185 aa		0.65	□□□□□ -2.31
YBR178W	YBR178W	BAR1	P12630	587 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	VPS33	P20795	691 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	SFP1	P32432	683 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	RPN2	P32565	945 aa	Known RBP	0.64	□□□□□ -2.31
YBR178W	YBR178W	MTC7	P32633	139 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	RIM2	P38127	377 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	DOT6	P40059	670 aa	Known RBP	0.64	□□□□□ -2.31
YBR178W	YBR178W	TIM54	P47045	478 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	COG2	P53271	262 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	POS5	Q06892	414 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	NOP8	Q08287	484 aa	Predicted RBP	0.64	□□□□□ -2.31
YBR178W	YBR178W	WRS1	Q12109	432 aa	Known RBP	0.64	□□□□□ -2.31
YBR178W	YBR178W	LCB4	Q12246	624 aa		0.64	□□□□□ -2.31
YBR178W	YBR178W	HMG1	P12683	1054 aa		0.63	□□□□□ -2.31
YBR178W	YBR178W	PLC1	P32383	869 aa		0.63	□□□□□ -2.31
YBR178W	YBR178W	PRS1	P32895	427 aa	Known RBP	0.63	□□□□□ -2.31
YBR178W	YBR178W	RRP8	P38961	392 aa	Known RBP	0.63	□□□□□ -2.31
YBR178W	YBR178W	VPS8	P39702	1274 aa		0.63	□□□□□ -2.31
YBR178W	YBR178W	PLM2	Q04383	521 aa		0.63	□□□□□ -2.31
YBR178W	YBR178W	YCG1	Q06680	1035 aa		0.63	□□□□□ -2.31
YBR178W	YBR178W	GIN4	Q12263	1142 aa		0.63	□□□□□ -2.31
YBR178W	YBR178W	TUF1	P02992	437 aa	Known RBP	0.62	□□□□□ -2.31
YBR178W	YBR178W	SES1	P07284	462 aa	Known RBP	0.62	□□□□□ -2.31
YBR178W	YBR178W	SWI6	P09959	803 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	BET2	P20133	325 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	AMD2	P22580	549 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	YEL045C	P32616	141 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	LOS1	P33418	1100 aa	Predicted RBP	0.62	□□□□□ -2.31
YBR178W	YBR178W	SDH8	P38345	138 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	PCM1	P38628	557 aa	Known RBP	0.62	□□□□□ -2.31
YBR178W	YBR178W	SAP1	P39955	897 aa	Known RBP	0.62	□□□□□ -2.31
YBR178W	YBR178W	MAM1	P40065	302 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	YJL049W	P47048	450 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	AIM14	P53109	570 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	YGL039W	P53183	348 aa	Known RBP	0.62	□□□□□ -2.31
YBR178W	YBR178W	YAT1	P80235	687 aa		0.62	□□□□□ -2.31
YBR178W	YBR178W	RPS17A	P02407	136 aa	Known RBP	0.61	□□□□□ -2.31
YBR178W	YBR178W	RPS17B	P14127	136 aa	Known RBP	0.61	□□□□□ -2.31
YBR178W	YBR178W	GSY1	P23337	708 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	SWC3	P31376	625 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	DSS4	P32601	143 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	IES1	P43579	692 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	IML2	P47031	731 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	SMA1	Q02651	245 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	YML119W	Q03208	357 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	PDR8	Q06149	701 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	PIG1	Q06216	648 aa		0.61	□□□□□ -2.31
YBR178W	YBR178W	CBP3	P21560	335 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	PCL2	P25693	308 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	MSN2	P33748	704 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	OCT1	P35999	772 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	LEU5	P38702	357 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	MDM31	P38880	579 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	RTS1	P38903	757 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	CDC1	P40986	491 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	UBP8	P50102	471 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	YGL036W	P53185	909 aa	Predicted RBP	0.6	□□□□□ -2.31
YBR178W	YBR178W	RNH70	P53331	553 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	NOP15	P53927	220 aa	Predicted RBP	0.6	□□□□□ -2.31
YBR178W	YBR178W	UBP16	Q02863	499 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	YML020W	Q03722	664 aa		0.6	□□□□□ -2.31
YBR178W	YBR178W	CBP1	P07252	654 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	HMG2	P12684	1045 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	MGR1	P25573	417 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	MSS51	P32335	436 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	TRS65	P32893	560 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	YJL132W	P47014	750 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	HUL5	P53119	910 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	MET13	P53128	600 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	YNL181W	P53878	407 aa		0.59	□□□□□ -2.31
YBR178W	YBR178W	PAL1	Q05518	499 aa	Known RBP	0.59	□□□□□ -2.31
YBR178W	YBR178W	PGI1	P12709	554 aa	Known RBP	0.58	□□□□□ -2.32
YBR178W	YBR178W	KGD2	P19262	463 aa	Predicted RBP	0.58	□□□□□ -2.32
YBR178W	YBR178W	MEF1	P25039	761 aa		0.58	□□□□□ -2.32
YBR178W	YBR178W	SPR1	P32603	445 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms