RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTA1	YAL043C	PCM1	P38628	557 aa	Known RBP	4.17	□□□□□ -1.74
PTA1	YAL043C	DIA4	P38705	446 aa	Predicted RBP	4.17	□□□□□ -1.74
PTA1	YAL043C	CKB2	P38930	258 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	SEC31	P38968	1273 aa	Known RBP	4.17	□□□□□ -1.74
PTA1	YAL043C	SIP5	P40210	489 aa	Known RBP	4.17	□□□□□ -1.74
PTA1	YAL043C	MAM33	P40513	266 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	SNZ3	P43545	298 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	SET2	P46995	733 aa	Known RBP	4.17	□□□□□ -1.74
PTA1	YAL043C	ALT1	P52893	592 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	KXD1	P53158	218 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	TIM13	P53299	105 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	SNZ2	P53824	298 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	REG1	Q00816	1014 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	BCP1	Q06338	283 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	RSC2	Q06488	889 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	CSR2	Q12734	1121 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	ADF1	Q2V2Q1	113 aa		4.17	□□□□□ -1.74
PTA1	YAL043C	CIT2	P08679	460 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	YCL068C	P25593	260 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	ADY2	P25613	283 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	CCR4	P31384	837 aa	Known RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	EFT1	P32324	842 aa	Known RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	NGG1	P32494	702 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	HXT5	P38695	592 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	GGA2	P38817	585 aa	Known RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	BEM4	P39011	633 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	STL1	P39932	569 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	MDJ2	P42834	146 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	MNP1	P53163	194 aa	Predicted RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	ASI2	P53895	289 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	CDC55	Q00362	526 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	ARO80	Q04052	950 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	JIP5	Q06214	492 aa	Predicted RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	ATG26	Q06321	1198 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	YDL121C	Q07541	149 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
PTA1	YAL043C	NTO1	Q12311	748 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	MAS2	P11914	482 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	CMP2	P14747	604 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	SAN1	P22470	610 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	PHO87	P25360	923 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	TFC3	P34111	1160 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	SRB2	P34162	210 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	AST1	P35183	429 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	MRPL7	P36519	292 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	INP51	P40559	946 aa	Known RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	NUT1	P53114	1132 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	COG2	P53271	262 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	MUB1	Q03162	620 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	THI7	Q05998	598 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	CRN1	Q06440	651 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	CUR1	Q06469	252 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	ENT4	Q07872	247 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	MSC6	Q08818	692 aa	Known RBP	4.16	□□□□□ -1.74
PTA1	YAL043C	SPE4	Q12455	300 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	AI5_ALPHA	Q9ZZX1	630 aa		4.16	□□□□□ -1.74
PTA1	YAL043C	ENO1	P00924	437 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	MPH2	P0CD99	609 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	VBA3	P25594	458 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	YUR1	P26725	428 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	ZIP1	P31111	875 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	CUE2	P36075	443 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	VBA5	P36172	582 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	MUM2	P38236	366 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	SSP120	P39931	234 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	SCS2	P40075	244 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	TMA108	P40462	946 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	BFA1	P47113	574 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	YGR283C	P53336	341 aa	Predicted RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	DCP2	P53550	970 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	NOP15	P53927	220 aa	Predicted RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	YNL058C	P53947	316 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	NAN1	Q02931	896 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	ADI1	Q03677	179 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	AIM39	Q08223	395 aa		4.15	□□□□□ -1.75
PTA1	YAL043C	TMA46	Q12000	345 aa	Known RBP	4.15	□□□□□ -1.75
PTA1	YAL043C	MOD5	P07884	428 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	FRE1	P32791	686 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	RPT5	P33297	434 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	MMS4	P38257	691 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	TDP1	P38319	544 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	SAH1	P39954	449 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	YEL025C	P39991	1188 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	ARB1	P40024	610 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	JEM1	P40358	645 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	ATM1	P40416	690 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	FAF1	P40546	346 aa	Predicted RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	POL31	P46957	487 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	PFD1	P46988	109 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	TRF5	P48561	642 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	AZR1	P50080	613 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	ARI1	P53111	347 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	MON1	P53129	644 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	ULP1	Q02724	621 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	KAP95	Q06142	861 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	ORM2	Q06144	216 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	THI20	Q08224	551 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	TYW1	Q08960	810 aa	Known RBP	4.14	□□□□□ -1.75
PTA1	YAL043C	THI21	Q08975	551 aa		4.14	□□□□□ -1.75
PTA1	YAL043C	VPS54	Q12071	889 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms