RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PI16Q6UXB8 463 aa12.38□□□□□ -0.43
PHGDH-222ENST00000641587 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
PHGDH-222ENST00000641587 PLXNB2O15031 1838 aa12.38□□□□□ -0.43
PHGDH-222ENST00000641587 A0A0C4DFX4 3053 aa12.38□□□□□ -0.43
PHGDH-222ENST00000641587 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
PHGDH-222ENST00000641587 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
PHGDH-222ENST00000641587 PEX10O60683 326 aa12.37□□□□□ -0.43
PHGDH-222ENST00000641587 IRX6P78412 446 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-222ENST00000641587 ZGPATQ8N5A5 531 aaKnown RBP12.37□□□□□ -0.43
PHGDH-222ENST00000641587 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
PHGDH-222ENST00000641587 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.37□□□□□ -0.43
PHGDH-222ENST00000641587 COPRSQ9NQ92 184 aa12.37□□□□□ -0.43
PHGDH-222ENST00000641587 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
PHGDH-222ENST00000641587 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
PHGDH-222ENST00000641587 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
PHGDH-222ENST00000641587 HMGCS2P54868 508 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 TFCP2Q12800 502 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 SPP2Q13103 211 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 FAM110CQ1W6H9 321 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 C7orf61Q8IZ16 206 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 COA7Q96BR5 231 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 FAM163AQ96GL9 167 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-222ENST00000641587 XAGE2Q96GT9 111 aa12.36□□□□□ -0.43
PHGDH-222ENST00000641587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■■■□ 19.6
PHGDH-222ENST00000641587 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-222ENST00000641587 GPR75-ASB3A0A0A6YYF3 556 aa12.35□□□□□ -0.43
PHGDH-222ENST00000641587 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-222ENST00000641587 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
PHGDH-222ENST00000641587 SLC17A8Q8NDX2 589 aa12.35□□□□□ -0.43
PHGDH-222ENST00000641587 ASCC2Q9H1I8 757 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-222ENST00000641587 HMG20BQ9P0W2 317 aa12.35□□□□□ -0.43
PHGDH-222ENST00000641587 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
PHGDH-222ENST00000641587 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
PHGDH-222ENST00000641587 ZBTB22O15209 634 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 TBC1D12O60347 775 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 HMGCRP04035 888 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 SYN1P17600 705 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-222ENST00000641587 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-222ENST00000641587 NECAB2Q7Z6G3 386 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 FTSJ3Q8IY81 847 aaKnown RBP12.34□□□□□ -0.43
PHGDH-222ENST00000641587 PROCA1Q8NCQ7 364 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-222ENST00000641587 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 NSUN4Q96CB9 384 aaKnown RBP12.34□□□□□ -0.43
PHGDH-222ENST00000641587 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-222ENST00000641587 GJD2Q9UKL4 321 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
PHGDH-222ENST00000641587 A0A1W2PPC1 479 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 DLL1O00548 723 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 SRGAP3O43295 1099 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 CAP2P40123 477 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 JAG1P78504 1218 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
PHGDH-222ENST00000641587 TRIB2Q92519 343 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 NEUROD6Q96NK8 337 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 GDF15Q99988 308 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 MYO5AQ9Y4I1 1855 aaKnown RBP12.33□□□□□ -0.44
PHGDH-222ENST00000641587 COL2A1P02458 1487 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-222ENST00000641587 LAMA2P24043 3122 aaKnown RBP12.33□□□□□ -0.44
PHGDH-222ENST00000641587 UNC80Q8N2C7 3258 aa12.33□□□□□ -0.44
PHGDH-222ENST00000641587 MS4A1P11836 297 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 CYP2B6P20813 491 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 MCAMP43121 646 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-222ENST00000641587 MTMR2Q13614 643 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 Q7L0L9 218 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-222ENST00000641587 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
PHGDH-222ENST00000641587 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 TXNRD2Q9NNW7 524 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 RAI14Q9P0K7 980 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 TNNQ9UQP3 1299 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 MAST2Q6P0Q8 1798 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
PHGDH-222ENST00000641587 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
PHGDH-222ENST00000641587 TRIM27P14373 513 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 SH3D19Q5HYK7 790 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 C20orf194Q5TEA3 1177 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-222ENST00000641587 AKAP2Q9Y2D5 859 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 PFASO15067 1338 aa12.31□□□□□ -0.44
PHGDH-222ENST00000641587 FOCADQ5VW36 1801 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 EYSQ5T1H1 3165 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
PHGDH-222ENST00000641587 ARID4AP29374 1257 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-222ENST00000641587 MAGEA10P43363 369 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-222ENST00000641587 ANKLE1Q8NAG6 615 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 ARHGAP45Q92619 1136 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 P2RX7Q99572 595 aaKnown RBP12.3□□□□□ -0.44
PHGDH-222ENST00000641587 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms