RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 VPS54Q9P1Q0 977 aa20.79■□□□□ 0.92
AC008878.3-201ENST00000617428 CTAGE9A4FU28 777 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 GRIPAP1Q4V328 841 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 CCDC155Q8N6L0 562 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 LRRC45Q96CN5 670 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 VPS16Q9H269 839 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 KDRP35968 1356 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 KCNQ4P56696 695 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 CHRNDQ07001 517 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 WDR44Q5JSH3 913 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 GREM2Q9H772 168 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 RNF187Q5TA31 235 aaPredicted RBP20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 SEC62Q99442 399 aaKnown RBP20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 CTNND2Q9UQB3 1225 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 RAD51AP2Q09MP3 1159 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 CNNM4Q6P4Q7 775 aa20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 APBB1IPQ7Z5R6 666 aaPredicted RBP20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 REXO1Q8N1G1 1221 aaKnown RBP20.78■□□□□ 0.92
AC008878.3-201ENST00000617428 DKC1O60832 514 aaKnown RBP eCLIP20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 STAMBPO95630 424 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 CNKSR1Q969H4 720 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 SSX2IPQ9Y2D8 614 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 PPP1R2P41236 205 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 FAM196AQ6ZSG2 479 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 AZI2Q9H6S1 392 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 CSADQ9Y600 493 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 KRT5P13647 590 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 HSPA4P34932 840 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 ARHGAP27Q6ZUM4 889 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 PPP1R9BQ96SB3 815 aa20.77■□□□□ 0.92
AC008878.3-201ENST00000617428 CETN3O15182 167 aa20.77■□□□□ 0.91
AC008878.3-201ENST00000617428 RASAL2Q9UJF2 1139 aa20.77■□□□□ 0.91
AC008878.3-201ENST00000617428 ABCC4O15439 1325 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 CSGALNACT2Q8N6G5 542 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 CAPZA3Q96KX2 299 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 BEGAINQ9BUH8 593 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 A0A1W2PRG0 241 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 CUTAO60888 179 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 DYMQ7RTS9 669 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 IFNL3Q8IZI9 196 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 OTUD6BQ8N6M0 293 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 DNM3Q9UQ16 869 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 A0A0D9SFI3 127 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 TCP10L2B9ZVM9 353 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 HSF2BPO75031 334 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 STRN3Q13033 797 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 CNGA4Q8IV77 575 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 DDX12PQ92771 950 aa20.76■□□□□ 0.91
AC008878.3-201ENST00000617428 GIGYF2Q6Y7W6 1299 aaKnown RBP20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 PLEKHG1Q9ULL1 1385 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 TERF1P54274 439 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 CALCRLQ16602 461 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 CHURC1Q8WUH1 139 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 IQCGQ9H095 443 aaKnown RBP20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 NPHP4O75161 1426 aaPredicted RBP20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 PRIMPOLQ96LW4 560 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 ARL1P40616 181 aaPredicted RBP20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 ZNF569Q5MCW4 686 aa20.75■□□□□ 0.91
AC008878.3-201ENST00000617428 RRP9O43818 475 aaKnown RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 IL6STP40189 918 aaPredicted RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 STAMQ92783 540 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 MCM6Q14566 821 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 CCDC77Q9BR77 488 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 STX10O60499 249 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 PDE8BO95263 885 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 ERCC3P19447 782 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 BMS1Q14692 1282 aaKnown RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 PAGR1Q9BTK6 254 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 TRIM6Q9C030 488 aaPredicted RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 ARFGAP3Q9NP61 516 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 SMCO2A6NFE2 343 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 PUS3Q9BZE2 481 aaKnown RBP20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 TBC1D7Q9P0N9 293 aa20.74■□□□□ 0.91
AC008878.3-201ENST00000617428 TRPC3Q13507 836 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 LEO1Q8WVC0 666 aaPredicted RBP20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 PHKA1P46020 1223 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 PLCD3Q8N3E9 789 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 ZKSCAN5Q9Y2L8 839 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 ZNF804BA4D1E1 1349 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 ZNF202O95125 648 aa20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 V9GYY5 206 aaPredicted RBP20.73■□□□□ 0.91
AC008878.3-201ENST00000617428 CDC37L1Q7L3B6 337 aa20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 AKR1B15C9JRZ8 316 aaPredicted RBP20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 BTDP43251 543 aa20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 CCDC122Q5T0U0 273 aa20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 MYCT1Q8N699 235 aa20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 EXOC7Q9UPT5 735 aa20.72■□□□□ 0.91
AC008878.3-201ENST00000617428 WDR17Q8IZU2 1322 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms