RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
FARP1-240ENST00000602263 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
FARP1-240ENST00000602263 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
FARP1-240ENST00000602263 RNF208Q9H0X6 261 aa12.85□□□□□ -0.35
FARP1-240ENST00000602263 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
FARP1-240ENST00000602263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
FARP1-240ENST00000602263 MYH1P12882 1939 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 GJB1P08034 283 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 PLCG2P16885 1265 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
FARP1-240ENST00000602263 CCDC84Q86UT8 332 aaPredicted RBP12.84□□□□□ -0.35
FARP1-240ENST00000602263 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
FARP1-240ENST00000602263 TMEM57Q8N5G2 664 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
FARP1-240ENST00000602263 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
FARP1-240ENST00000602263 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.84□□□□□ -0.35
FARP1-240ENST00000602263 HERC5Q9UII4 1024 aaKnown RBP12.84□□□□□ -0.35
FARP1-240ENST00000602263 ADCY3O60266 1144 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 GJA8P48165 433 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
FARP1-240ENST00000602263 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 COA7Q96BR5 231 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 DHX36Q9H2U1 1008 aaKnown RBP12.83□□□□□ -0.36
FARP1-240ENST00000602263 AS3MTQ9HBK9 375 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 SIPA1L1O43166 1804 aa12.83□□□□□ -0.36
FARP1-240ENST00000602263 USP17L5A8MUK1 530 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 IGSF3O75054 1194 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
FARP1-240ENST00000602263 CAP2P40123 477 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 FLT3LGP49771 235 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 SPP2Q13103 211 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 IRF5Q13568 498 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 POLA2Q14181 598 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 FAM110CQ1W6H9 321 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 TREML2Q5T2D2 321 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 SH3RF3Q8TEJ3 882 aaPredicted RBP12.82□□□□□ -0.36
FARP1-240ENST00000602263 DPF3Q92784 378 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 DBNDD2Q9BQY9 259 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 AATFQ9NY61 560 aaKnown RBP eCLIP12.82□□□□□ -0.36
FARP1-240ENST00000602263 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
FARP1-240ENST00000602263 H0YGN5 161 aa12.81□□□□□ -0.36
FARP1-240ENST00000602263 GCLCP48506 637 aaPredicted RBP12.81□□□□□ -0.36
FARP1-240ENST00000602263 HMGCS2P54868 508 aa12.81□□□□□ -0.36
FARP1-240ENST00000602263 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
FARP1-240ENST00000602263 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
FARP1-240ENST00000602263 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
FARP1-240ENST00000602263 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
FARP1-240ENST00000602263 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
FARP1-240ENST00000602263 U2AF1L4Q8WU68 220 aaKnown RBP12.81□□□□□ -0.36
FARP1-240ENST00000602263 UNC93B1Q9H1C4 597 aa12.81□□□□□ -0.36
FARP1-240ENST00000602263 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
FARP1-240ENST00000602263 FARP2O94887 1054 aaPredicted RBP12.8□□□□□ -0.36
FARP1-240ENST00000602263 INHAP05111 366 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 ASNSP08243 561 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 ELNP15502 786 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 CAPN2P17655 700 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
FARP1-240ENST00000602263 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 FLT1P17948 1338 aa12.8□□□□□ -0.36
FARP1-240ENST00000602263 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
FARP1-240ENST00000602263 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
FARP1-240ENST00000602263 PPP4CP60510 307 aa12.79□□□□□ -0.36
FARP1-240ENST00000602263 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
FARP1-240ENST00000602263 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
FARP1-240ENST00000602263 NR2E3Q9Y5X4 410 aa12.79□□□□□ -0.36
FARP1-240ENST00000602263 RANBP2P49792 3224 aaKnown RBP12.79□□□□□ -0.36
FARP1-240ENST00000602263 SGPL1O95470 568 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
FARP1-240ENST00000602263 ZAP70P43403 619 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 FXR1P51114 621 aaKnown RBP eCLIP12.78□□□□□ -0.36
FARP1-240ENST00000602263 MTMR2Q13614 643 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
FARP1-240ENST00000602263 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
FARP1-240ENST00000602263 WDR18Q9BV38 432 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 ASCC2Q9H1I8 757 aaPredicted RBP12.78□□□□□ -0.36
FARP1-240ENST00000602263 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
FARP1-240ENST00000602263 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
FARP1-240ENST00000602263 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
FARP1-240ENST00000602263 C19orf81C9J6K1 198 aa12.77□□□□□ -0.37
FARP1-240ENST00000602263 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.37
FARP1-240ENST00000602263 CYP7A1P22680 504 aa12.77□□□□□ -0.37
FARP1-240ENST00000602263 BACE1P56817 501 aa12.77□□□□□ -0.37
FARP1-240ENST00000602263 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
FARP1-240ENST00000602263 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms