RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
FARP1-240ENST00000602263 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
FARP1-240ENST00000602263 ABCC9O60706 1549 aa23.49■■□□□ 1.35
FARP1-240ENST00000602263 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
FARP1-240ENST00000602263 NACADO15069 1562 aa22.25■■□□□ 1.15
FARP1-240ENST00000602263 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
FARP1-240ENST00000602263 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
FARP1-240ENST00000602263 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
FARP1-240ENST00000602263 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
FARP1-240ENST00000602263 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
FARP1-240ENST00000602263 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
FARP1-240ENST00000602263 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
FARP1-240ENST00000602263 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
FARP1-240ENST00000602263 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
FARP1-240ENST00000602263 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
FARP1-240ENST00000602263 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
FARP1-240ENST00000602263 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
FARP1-240ENST00000602263 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
FARP1-240ENST00000602263 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
FARP1-240ENST00000602263 SMARCA4P51532 1647 aa20.45■□□□□ 0.87
FARP1-240ENST00000602263 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
FARP1-240ENST00000602263 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
FARP1-240ENST00000602263 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
FARP1-240ENST00000602263 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
FARP1-240ENST00000602263 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
FARP1-240ENST00000602263 CUX2O14529 1486 aa20.28■□□□□ 0.84
FARP1-240ENST00000602263 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
FARP1-240ENST00000602263 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
FARP1-240ENST00000602263 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
FARP1-240ENST00000602263 MROH2BQ7Z745 1585 aa20.16■□□□□ 0.82
FARP1-240ENST00000602263 NESP48681 1621 aa20.16■□□□□ 0.82
FARP1-240ENST00000602263 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
FARP1-240ENST00000602263 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
FARP1-240ENST00000602263 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
FARP1-240ENST00000602263 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
FARP1-240ENST00000602263 WIZO95785 1651 aa19.95■□□□□ 0.78
FARP1-240ENST00000602263 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
FARP1-240ENST00000602263 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
FARP1-240ENST00000602263 WDR62O43379 1518 aa19.73■□□□□ 0.75
FARP1-240ENST00000602263 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
FARP1-240ENST00000602263 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
FARP1-240ENST00000602263 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
FARP1-240ENST00000602263 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
FARP1-240ENST00000602263 CFTRP13569 1480 aa19.65■□□□□ 0.74
FARP1-240ENST00000602263 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
FARP1-240ENST00000602263 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
FARP1-240ENST00000602263 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
FARP1-240ENST00000602263 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
FARP1-240ENST00000602263 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
FARP1-240ENST00000602263 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
FARP1-240ENST00000602263 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
FARP1-240ENST00000602263 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
FARP1-240ENST00000602263 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
FARP1-240ENST00000602263 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
FARP1-240ENST00000602263 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
FARP1-240ENST00000602263 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
FARP1-240ENST00000602263 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
FARP1-240ENST00000602263 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
FARP1-240ENST00000602263 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
FARP1-240ENST00000602263 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
FARP1-240ENST00000602263 CHD1O14646 1710 aa19.08■□□□□ 0.64
FARP1-240ENST00000602263 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.641e-8■■□□□ 13
FARP1-240ENST00000602263 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
FARP1-240ENST00000602263 SOGA1O94964 1423 aa19■□□□□ 0.63
FARP1-240ENST00000602263 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
FARP1-240ENST00000602263 WDR97A6NE52 1622 aa18.99■□□□□ 0.63
FARP1-240ENST00000602263 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
FARP1-240ENST00000602263 FBLN2P98095 1184 aa18.96■□□□□ 0.63
FARP1-240ENST00000602263 CUX1P39880 1505 aa18.95■□□□□ 0.62
FARP1-240ENST00000602263 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
FARP1-240ENST00000602263 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
FARP1-240ENST00000602263 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
FARP1-240ENST00000602263 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
FARP1-240ENST00000602263 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
FARP1-240ENST00000602263 CYB5RLQ6IPT4 315 aa18.85■□□□□ 0.61
FARP1-240ENST00000602263 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
FARP1-240ENST00000602263 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
FARP1-240ENST00000602263 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.6
FARP1-240ENST00000602263 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
FARP1-240ENST00000602263 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
FARP1-240ENST00000602263 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
FARP1-240ENST00000602263 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
FARP1-240ENST00000602263 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
FARP1-240ENST00000602263 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
FARP1-240ENST00000602263 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
FARP1-240ENST00000602263 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
FARP1-240ENST00000602263 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
FARP1-240ENST00000602263 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
FARP1-240ENST00000602263 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
FARP1-240ENST00000602263 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
FARP1-240ENST00000602263 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
FARP1-240ENST00000602263 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
FARP1-240ENST00000602263 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
FARP1-240ENST00000602263 NUP160Q12769 1436 aa18.53■□□□□ 0.56
FARP1-240ENST00000602263 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
FARP1-240ENST00000602263 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
FARP1-240ENST00000602263 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
FARP1-240ENST00000602263 PRG4Q92954 1404 aaPredicted RBP18.35■□□□□ 0.53
FARP1-240ENST00000602263 CUL7Q14999 1698 aa18.33■□□□□ 0.52
FARP1-240ENST00000602263 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms