RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 LRP2BPQ9P2M1 347 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 AGTPBP1Q9UPW5 1226 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 PNMA6EA0A0J9YXQ4 647 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
CHMP2A-202ENST00000596708 UQCRFS1P1P0C7P4 283 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 TRIM27P14373 513 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
CHMP2A-202ENST00000596708 SPP2Q13103 211 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 TREML2Q5T2D2 321 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 TEX11Q8IYF3 940 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 U2AF1L4Q8WU68 220 aaKnown RBP13□□□□□ -0.33
CHMP2A-202ENST00000596708 COA7Q96BR5 231 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 TNNQ9UQP3 1299 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 ALPK3Q96L96 1907 aa13□□□□□ -0.33
CHMP2A-202ENST00000596708 SIPA1L1O43166 1804 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 BCAR3O75815 825 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 SGPL1O95470 568 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 ELNP15502 786 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 MCAMP43121 646 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 ZNF280CQ8ND82 737 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 MAST2Q6P0Q8 1798 aa12.99□□□□□ -0.33
CHMP2A-202ENST00000596708 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 BAG3O95817 575 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 INHAP05111 366 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 CAP2P40123 477 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 HMGCS2P54868 508 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 PABPC4Q13310 644 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 IRF5Q13568 498 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 AS3MTQ9HBK9 375 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHMP2A-202ENST00000596708 FAM110CQ1W6H9 321 aa12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 NAA16Q6N069 864 aaPredicted RBP12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 DEFB118Q96PH6 123 aa12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 PI4KBQ9UBF8 816 aa12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 HERC5Q9UII4 1024 aaKnown RBP12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 NR2E3Q9Y5X4 410 aa12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 COL2A1P02458 1487 aaPredicted RBP12.97□□□□□ -0.33
CHMP2A-202ENST00000596708 GCLCP48506 637 aaPredicted RBP12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 TNNI3KQ59H18 835 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 MAPKAPK5Q8IW41 473 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 TMEM57Q8N5G2 664 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 TGFBRAP1Q8WUH2 860 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 DHX36Q9H2U1 1008 aaKnown RBP12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.33
CHMP2A-202ENST00000596708 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 PLCG2P16885 1265 aa12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 ATP8B2P98198 1209 aa12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 DBNDD2Q9BQY9 259 aa12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 TMOD4Q9NZQ9 345 aa12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
CHMP2A-202ENST00000596708 EVI5O60447 810 aa12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 CAPN2P17655 700 aa12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 POLA2Q14181 598 aa12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 SH3D19Q5HYK7 790 aa12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 CRACR2BQ8N4Y2 399 aaPredicted RBP12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
CHMP2A-202ENST00000596708 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 CYP2E1P05181 493 aaPredicted RBP12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 ASNSP08243 561 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 ZAP70P43403 619 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 BACE1P56817 501 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 PPP4CP60510 307 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 MTMR2Q13614 643 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 PAK6Q9NQU5 681 aaPredicted RBP12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 PALD1Q9ULE6 856 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 MYH8P13535 1937 aa12.93□□□□□ -0.34
CHMP2A-202ENST00000596708 FLT1P17948 1338 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 C19orf81C9J6K1 198 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 GDF11O95390 407 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 HMGCRP04035 888 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 HLA-DOAP06340 250 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms