RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 NARFQ9UHQ1 456 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 TOM1O60784 492 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 RPS8P62241 208 aaKnown RBP26.23■■□□□ 1.79
SRRM1-222ENST00000596378 ISM2Q6H9L7 571 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 PPP6R2O75170 966 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 MMP1P03956 469 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 SLC51AQ86UW1 340 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 DIS3L2Q8IYB7 885 aaKnown RBP26.23■■□□□ 1.79
SRRM1-222ENST00000596378 TRIM22Q8IYM9 498 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 CRACR2BQ8N4Y2 399 aaPredicted RBP26.23■■□□□ 1.79
SRRM1-222ENST00000596378 FANCBQ8NB91 859 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 CACTINQ8WUQ7 758 aaKnown RBP26.23■■□□□ 1.79
SRRM1-222ENST00000596378 JAG2Q9Y219 1238 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 BTAF1O14981 1849 aa26.23■■□□□ 1.79
SRRM1-222ENST00000596378 SYKP43405 635 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 RBM10P98175 930 aaKnown RBP26.22■■□□□ 1.79
SRRM1-222ENST00000596378 SEC23AQ15436 765 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 ZRSR1Q15695 479 aaKnown RBP26.22■■□□□ 1.79
SRRM1-222ENST00000596378 NOSTRINQ8IVI9 506 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 NLRP3Q96P20 1036 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 NAT10Q9H0A0 1025 aaKnown RBP26.22■■□□□ 1.79
SRRM1-222ENST00000596378 ANAPC4Q9UJX5 808 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 RPS6KA4O75676 772 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 CDC25BP30305 580 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 ARID5BQ14865 1188 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 FBXO33Q7Z6M2 555 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 WASF1Q92558 559 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 ESR2Q92731 530 aa26.22■■□□□ 1.79
SRRM1-222ENST00000596378 MRFAP1L1Q96HT8 127 aa26.21■■□□□ 1.79
SRRM1-222ENST00000596378 HPSEQ9Y251 543 aa26.21■■□□□ 1.79
SRRM1-222ENST00000596378 DUOX1Q9NRD9 1551 aa26.21■■□□□ 1.79
SRRM1-222ENST00000596378 ZPR1O75312 459 aa26.21■■□□□ 1.79
SRRM1-222ENST00000596378 TOB1P50616 345 aaPredicted RBP26.21■■□□□ 1.79
SRRM1-222ENST00000596378 CHAF1AQ13111 956 aaPredicted RBP26.21■■□□□ 1.79
SRRM1-222ENST00000596378 MYH13Q9UKX3 1938 aa26.21■■□□□ 1.79
SRRM1-222ENST00000596378 NR5A1Q13285 461 aa26.2■■□□□ 1.79
SRRM1-222ENST00000596378 SPECC1Q5M775 1068 aa26.2■■□□□ 1.79
SRRM1-222ENST00000596378 TMTC2Q8N394 836 aa26.2■■□□□ 1.79
SRRM1-222ENST00000596378 ENAHQ8N8S7 591 aaPredicted RBP26.2■■□□□ 1.79
SRRM1-222ENST00000596378 JMYQ8N9B5 988 aa26.2■■□□□ 1.79
SRRM1-222ENST00000596378 NYXQ9GZU5 481 aa26.2■■□□□ 1.79
SRRM1-222ENST00000596378 MECOMQ03112 1051 aa26.2■■□□□ 1.78
SRRM1-222ENST00000596378 NSUN4Q96CB9 384 aaKnown RBP26.2■■□□□ 1.78
SRRM1-222ENST00000596378 CCNL1Q9UK58 526 aaPredicted RBP26.2■■□□□ 1.78
SRRM1-222ENST00000596378 DEXIO95424 95 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 TXNRD3Q86VQ6 643 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 OXER1Q8TDS5 423 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 AATFQ9NY61 560 aaKnown RBP eCLIP26.19■■□□□ 1.78
SRRM1-222ENST00000596378 MYH6P13533 1939 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 hCG_1642624A0A1W2PR95 340 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 NLRP12P59046 1061 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 SAFBQ15424 915 aaKnown RBP eCLIP26.19■■□□□ 1.78
SRRM1-222ENST00000596378 RESP18Q5W5W9 173 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 CTR9Q6PD62 1173 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 MTA3Q9BTC8 594 aa26.19■■□□□ 1.78
SRRM1-222ENST00000596378 COL24A1Q17RW2 1714 aa26.18■■□□□ 1.78
SRRM1-222ENST00000596378 PRDX5P30044 214 aa26.18■■□□□ 1.78
SRRM1-222ENST00000596378 SHISA4Q96DD7 197 aa26.18■■□□□ 1.78
SRRM1-222ENST00000596378 ZSCAN10Q96SZ4 725 aaPredicted RBP26.18■■□□□ 1.78
SRRM1-222ENST00000596378 BRIP1Q9BX63 1249 aa26.18■■□□□ 1.78
SRRM1-222ENST00000596378 CCDC196A0A1B0GTZ2 297 aa26.17■■□□□ 1.78
SRRM1-222ENST00000596378 USP17L12C9JPN9 530 aa26.17■■□□□ 1.78
SRRM1-222ENST00000596378 USP17L21D6R901 530 aa26.17■■□□□ 1.78
SRRM1-222ENST00000596378 HIBADHP31937 336 aaKnown RBP26.17■■□□□ 1.78
SRRM1-222ENST00000596378 GRIN1Q05586 938 aa26.17■■□□□ 1.78
SRRM1-222ENST00000596378 PNOCQ13519 176 aa26.17■■□□□ 1.78
SRRM1-222ENST00000596378 RC3H1Q5TC82 1133 aaKnown RBP26.17■■□□□ 1.78
SRRM1-222ENST00000596378 FILIP1Q7Z7B0 1213 aa26.17■■□□□ 1.78
SRRM1-222ENST00000596378 ARHGEF1Q92888 912 aaKnown RBP26.17■■□□□ 1.78
SRRM1-222ENST00000596378 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.17■■□□□ 1.78
SRRM1-222ENST00000596378 CUTAO60888 179 aa26.16■■□□□ 1.78
SRRM1-222ENST00000596378 ATP2B1P20020 1258 aa26.16■■□□□ 1.78
SRRM1-222ENST00000596378 TPTE2Q6XPS3 522 aa26.16■■□□□ 1.78
SRRM1-222ENST00000596378 MYRIPQ8NFW9 859 aa26.16■■□□□ 1.78
SRRM1-222ENST00000596378 TIGD1Q96MW7 591 aa26.16■■□□□ 1.78
SRRM1-222ENST00000596378 FAM13BQ9NYF5 915 aa26.16■■□□□ 1.78
SRRM1-222ENST00000596378 RTCBQ9Y3I0 505 aaKnown RBP26.16■■□□□ 1.78
SRRM1-222ENST00000596378 RBM6P78332 1123 aaKnown RBP26.15■■□□□ 1.78
SRRM1-222ENST00000596378 HSP90AA2PQ14568 343 aaPredicted RBP26.15■■□□□ 1.78
SRRM1-222ENST00000596378 LONRF3Q496Y0 759 aa26.15■■□□□ 1.78
SRRM1-222ENST00000596378 IFIT1BQ5T764 474 aaKnown RBP26.15■■□□□ 1.78
SRRM1-222ENST00000596378 PCDHB6Q9Y5E3 794 aa26.15■■□□□ 1.78
SRRM1-222ENST00000596378 PLEKHA8P1O95397 391 aa26.15■■□□□ 1.78
SRRM1-222ENST00000596378 SLC4A8Q2Y0W8 1093 aa26.15■■□□□ 1.78
SRRM1-222ENST00000596378 TSC1Q92574 1164 aa26.15■■□□□ 1.78
SRRM1-222ENST00000596378 FOXP1Q9H334 677 aaPredicted RBP26.15■■□□□ 1.78
SRRM1-222ENST00000596378 TNRC6CQ9HCJ0 1690 aaKnown RBP26.14■■□□□ 1.78
SRRM1-222ENST00000596378 FAM237AA0A1B0GTK4 181 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 NMT2O60551 498 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 TM4SF1P30408 202 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 RCAN1P53805 252 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 LRRC8AQ8IWT6 810 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 KRI1Q8N9T8 703 aaKnown RBP26.14■■□□□ 1.78
SRRM1-222ENST00000596378 BPIFA3Q9BQP9 254 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 VPS54Q9P1Q0 977 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 KCNH3Q9ULD8 1083 aa26.14■■□□□ 1.78
SRRM1-222ENST00000596378 SEMA3EO15041 775 aa26.14■■□□□ 1.77
SRRM1-222ENST00000596378 NPHP1O15259 732 aa26.14■■□□□ 1.77
SRRM1-222ENST00000596378 CYP2D6P10635 497 aa26.14■■□□□ 1.77
SRRM1-222ENST00000596378 METTL16Q86W50 562 aaKnown RBP26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms