RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 SCN9AQ15858 1988 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 CAPN15O75808 1086 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 GNAT2P19087 354 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 MAP2K2P36507 400 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 EVCP57679 992 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 PRKG1Q13976 671 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
VPS25-205ENST00000590339 CFAP100Q494V2 611 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 RGMBQ6NW40 437 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 TBC1D10CQ8IV04 446 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 LCORLQ8N3X6 602 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 TDRD7Q8NHU6 1098 aaKnown RBP11.11□□□□□ -0.63
VPS25-205ENST00000590339 ZNF384Q8TF68 577 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 CLRN2A0PK11 232 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 GSG1L2A8MUP6 293 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 PFKFB2O60825 505 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 GJB2P29033 226 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 ANTXR2P58335 489 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 MFSD14BQ5SR56 506 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 ADGRA1Q86SQ6 560 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 PRMT6Q96LA8 375 aaPredicted RBP11.1□□□□□ -0.63
VPS25-205ENST00000590339 RIOK1Q9BRS2 568 aaKnown RBP11.1□□□□□ -0.63
VPS25-205ENST00000590339 ARMT1Q9H993 441 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
VPS25-205ENST00000590339 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 FOCADQ5VW36 1801 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
VPS25-205ENST00000590339 PATL2C9JE40 543 aaKnown RBP11.09□□□□□ -0.63
VPS25-205ENST00000590339 ZNF213O14771 459 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 HSPA8P11142 646 aaKnown RBP11.09□□□□□ -0.63
VPS25-205ENST00000590339 CYP7A1P22680 504 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 HAND2P61296 217 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 IFNL3Q8IZI9 196 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 NECAB1Q8N987 351 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 BRF1Q92994 677 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
VPS25-205ENST00000590339 FAM205AQ6ZU69 1335 aa11.09□□□□□ -0.63
VPS25-205ENST00000590339 NID2Q14112 1375 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 GOLGA6L22H0YM25 854 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 STX6O43752 255 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 MYO1BO43795 1136 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 TRAK2O60296 914 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 ZSCAN22P10073 491 aaPredicted RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 SYT1P21579 422 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 NF2P35240 595 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 MMP14P50281 582 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 FKBP1AP62942 108 aaKnown RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 KIF23Q02241 960 aaPredicted RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 NOGQ13253 232 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 GRIK5Q16478 980 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 NCOA7Q8NI08 942 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 ZBED3Q96IU2 234 aaPredicted RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 LLPHQ9BRT6 129 aaKnown RBP11.08□□□□□ -0.64
VPS25-205ENST00000590339 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 DEFB129Q9H1M3 183 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 MTMR6Q9Y217 621 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 NEDD4P46934 1319 aa11.08□□□□□ -0.64
VPS25-205ENST00000590339 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 MAGEB6P1A0A0J9YX57 407 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 SPDYE2BA6NHP3 402 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 FAM155AB1AL88 458 aaPredicted RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 PRC1O43663 620 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 PRKAB2O43741 272 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 SPDYE6P0CI01 402 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 MCM5P33992 734 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 SCRN1Q12765 414 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 GSE1Q14687 1217 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 SKOR2Q2VWA4 1001 aaPredicted RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 NAA16Q6N069 864 aaPredicted RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 RALYLQ86SE5 291 aaKnown RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 STAG1Q8WVM7 1258 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 ZNF274Q96GC6 653 aaPredicted RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 NAPBQ9H115 298 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
VPS25-205ENST00000590339 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 LMBRD1Q9NUN5 540 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 ABCF2Q9UG63 623 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 ANAPC4Q9UJX5 808 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 TACC3Q9Y6A5 838 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 TCHHQ07283 1943 aa11.07□□□□□ -0.64
VPS25-205ENST00000590339 F13A1P00488 732 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 PRDX5P30044 214 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 FKBP1BP68106 108 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 MECOMQ03112 1051 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 APOBRQ0VD83 1088 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
VPS25-205ENST00000590339 GIMAP6Q6P9H5 292 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 MIGA1Q8NAN2 632 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms