RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PHLPP2Q6ZVD8 1323 aa16.31■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SLC5A1P13866 664 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 DIS3L2Q8IYB7 885 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 BCL9O00512 1426 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 FOXN1O15353 648 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 PTPREP23469 700 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 PDE4BQ07343 736 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 RILPL1Q5EBL4 403 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 NT5DC1Q5TFE4 455 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 AK7Q96M32 723 aa16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-237ENST00000585163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.21e-7■■□□□ 13.3
CDK5RAP3-237ENST00000585163 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ERCC6LQ2NKX8 1250 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 POSTNQ15063 836 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 RTN1Q16799 776 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MTA3Q9BTC8 594 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 PNPLA7Q6ZV29 1317 aa16.29■□□□□ 0.2
CDK5RAP3-237ENST00000585163 H2AFXP16104 143 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 GNAT2P19087 354 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TMEM139Q8IV31 216 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 REXO1L1PQ8IX06 675 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 DNAI1Q9UI46 699 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MAN1B1Q9UKM7 699 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 PRKAB2O43741 272 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 IL6STP40189 918 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SARSP49591 514 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 GRIN1Q05586 938 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 WTAPQ15007 396 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 LRRN4CLQ8ND94 238 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ARHGAP6O43182 974 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 DEXIO95424 95 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 RCAN1P53805 252 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TBX2Q13207 712 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MLKLQ8NB16 471 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SLIT2O94813 1529 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 CCDC196A0A1B0GTZ2 297 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SNAP23O00161 211 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 NPHP1O15259 732 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZNF18P17022 549 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TDO2P48775 406 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 LCORLQ8N3X6 602 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZKSCAN3Q9BRR0 538 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ENOX1Q8TC92 643 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 DACH1Q9UI36 760 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 ERICH2A1L162 156 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 FANCGO15287 622 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 GOLGA8FQ08AF8 430 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 GOLGA8DPQ0D2H9 430 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 MORC3Q14149 939 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TRIML1Q8N9V2 468 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 TOMM22Q9NS69 142 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SRPRBQ9Y5M8 271 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-237ENST00000585163 IGSF3O75054 1194 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 NR5A1Q13285 461 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 FANCBQ8NB91 859 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 SRRTQ9BXP5 876 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 KANK3Q6NY19 840 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CCDC82Q8N4S0 544 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 CEP131Q9UPN4 1083 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 PPP2R2CQ9Y2T4 447 aa16.25■□□□□ 0.19
CDK5RAP3-237ENST00000585163 HSPA2P54652 639 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms