RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 SPSB2Q99619 263 aa10.35□□□□□ -0.75
SUPT4H1-206ENST00000581204 LRRCC1Q9C099 1032 aa10.35□□□□□ -0.75
SUPT4H1-206ENST00000581204 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
SUPT4H1-206ENST00000581204 KIAA0100Q14667 2235 aaKnown RBP10.35□□□□□ -0.75
SUPT4H1-206ENST00000581204 H7C1D1 291 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 SOX1O00570 391 aaPredicted RBP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 IRS4O14654 1257 aaPredicted RBP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 F12P00748 615 aaPredicted RBP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 HSP90B1P14625 803 aaKnown RBP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 FOXO4P98177 505 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 G3BP1Q13283 466 aaKnown RBP eCLIP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 TNIP1Q15025 636 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 RABL6Q3YEC7 729 aaPredicted RBP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 SUSD4Q5VX71 490 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 MOB2Q70IA6 237 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 DPF2Q92785 391 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 GPKOWQ92917 476 aaPredicted RBP eCLIP10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 ALG2Q9H553 416 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 ATP6V0A2Q9Y487 856 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 TRIM17Q9Y577 477 aa10.34□□□□□ -0.75
SUPT4H1-206ENST00000581204 UBN2Q6ZU65 1347 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 SH3TC1Q8TE82 1336 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 DXOO77932 396 aaKnown RBP10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 CCNYL3P0C7X3 344 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 CAP1Q01518 475 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 NR1H3Q13133 447 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 RPGRQ92834 1020 aaKnown RBP10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 DCPSQ96C86 337 aaKnown RBP10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 KIF1BPQ96EK5 621 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 PLA2G12BQ9BX93 195 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 PA2G4Q9UQ80 394 aaKnown RBP10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 MYH3P11055 1940 aa10.33□□□□□ -0.76
SUPT4H1-206ENST00000581204 CEP290O15078 2479 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 LAMB1P07942 1786 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 PSMD14O00487 310 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 PDE8AO60658 829 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 MMP16P51512 607 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 FKBP1BP68106 108 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 TAF7LQ5H9L4 462 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 SIL1Q9H173 461 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 PTPN22Q9Y2R2 807 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 NOP58Q9Y2X3 529 aaKnown RBP10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 LRRC37AA6NMS7 1700 aa10.32□□□□□ -0.76
SUPT4H1-206ENST00000581204 RTL9Q8NET4 1388 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 NTSR2O95665 410 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 ADH1BP00325 375 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 CTSWP56202 376 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 IFIT5Q13325 482 aaKnown RBP10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 SUPT20HQ8NEM7 779 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 KLHDC4Q8TBB5 520 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 ADAMTS19Q8TE59 1207 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 RBM17Q96I25 401 aaKnown RBP10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 ZNF333Q96JL9 665 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 CCDC85AQ96PX6 553 aaPredicted RBP10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 IL1RAPL2Q9NP60 686 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
SUPT4H1-206ENST00000581204 ANKRD18BA2A2Z9 1011 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 CTHP32929 405 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 RFX5P48382 616 aaPredicted RBP10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 COPS2P61201 443 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 PBXIP1Q96AQ6 731 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 NUDT12Q9BQG2 462 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 EVA1BQ9NVM1 165 aa10.3□□□□□ -0.76
SUPT4H1-206ENST00000581204 LAMB2P55268 1798 aa10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 CSF1RP07333 972 aa10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 PTPN12Q05209 780 aaKnown RBP10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 DPP8Q6V1X1 898 aaPredicted RBP10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 PPP1R12CQ9BZL4 782 aa10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
SUPT4H1-206ENST00000581204 SCN9AQ15858 1988 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 UBE2Q2LH0YL09 131 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 IFIT2P09913 472 aaKnown RBP10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 MX1P20591 662 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 ITGA6P23229 1130 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 RPS12P25398 132 aaKnown RBP10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 SREBF2Q12772 1141 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 KCNH2Q12809 1159 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 CCDC152Q4G0S7 254 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 GPATCH3Q96I76 525 aa10.28□□□□□ -0.76
SUPT4H1-206ENST00000581204 ZNF594Q96JF6 807 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms