RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 GJB1P08034 283 aa15.43■□□□□ 0.06
SMARCD2-207ENST00000578234 GJA8P48165 433 aa15.43■□□□□ 0.06
SMARCD2-207ENST00000578234 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
SMARCD2-207ENST00000578234 PRKCZQ05513 592 aa15.43■□□□□ 0.06
SMARCD2-207ENST00000578234 SLAIN1Q8ND83 568 aa15.43■□□□□ 0.06
SMARCD2-207ENST00000578234 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
SMARCD2-207ENST00000578234 FAM196BA6NMK8 535 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 IGSF3O75054 1194 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 CAP2P40123 477 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 TNNI3KQ59H18 835 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 CCDC158Q5M9N0 1113 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 TEX11Q8IYF3 940 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 SHISA4Q96DD7 197 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 ZNF512BQ96KM6 892 aaPredicted RBP15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 NOL10Q9BSC4 688 aaKnown RBP15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 HERC5Q9UII4 1024 aaKnown RBP15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 GABRQQ9UN88 632 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 FPGT-TNNI3KV9GXZ4 949 aa15.42■□□□□ 0.06
SMARCD2-207ENST00000578234 TNPO2O14787 897 aaKnown RBP15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 ADCY3O60266 1144 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 BAG3O95817 575 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 TFRCP02786 760 aaKnown RBP15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 PLCG2P16885 1265 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 FLT3LGP49771 235 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 PPP4CP60510 307 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 SPP2Q13103 211 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 IRF5Q13568 498 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 TTC39AQ5SRH9 613 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 NAA16Q6N069 864 aaPredicted RBP15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 ZNF280CQ8ND82 737 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 PXYLP1Q8TE99 480 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 SH3RF3Q8TEJ3 882 aaPredicted RBP15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 PI4KBQ9UBF8 816 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 PNMA3Q9UL41 463 aa15.41■□□□□ 0.06
SMARCD2-207ENST00000578234 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 ELNP15502 786 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 OS9Q13438 667 aaPredicted RBP15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 FAM110CQ1W6H9 321 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 TREML2Q5T2D2 321 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 DBNDD2Q9BQY9 259 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 HTATIP2Q9BUP3 242 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 UNC93B1Q9H1C4 597 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 TRIOBPQ9H2D6 2365 aa15.4■□□□□ 0.06
SMARCD2-207ENST00000578234 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 CYP2E1P05181 493 aaPredicted RBP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 CAPN2P17655 700 aa15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 FXR1P51114 621 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 PABPC4Q13310 644 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 RRP1BQ14684 758 aaKnown RBP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 SH3D19Q5HYK7 790 aa15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 ANKRD13CQ8N6S4 541 aa15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 AATFQ9NY61 560 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 DOCK3Q8IZD9 2030 aa15.39■□□□□ 0.05
SMARCD2-207ENST00000578234 ZBTB7BO15156 539 aaPredicted RBP15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 METTL16Q86W50 562 aaKnown RBP15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 FOXP4Q8IVH2 680 aaPredicted RBP15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 U2AF1L4Q8WU68 220 aaKnown RBP15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 COA7Q96BR5 231 aa15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 TRIM34Q9BYJ4 488 aa15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 AS3MTQ9HBK9 375 aa15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 NR2E3Q9Y5X4 410 aa15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 ATAD5Q96QE3 1844 aa15.38■□□□□ 0.05
SMARCD2-207ENST00000578234 LOC285556D6RIA3 1793 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 FARP2O94887 1054 aaPredicted RBP15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 SGPL1O95470 568 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 ASNSP08243 561 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 HMGCS2P54868 508 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 ADGRA1Q86SQ6 560 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 FTSJ3Q8IY81 847 aaKnown RBP15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 TGFBRAP1Q8WUH2 860 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 WDR18Q9BV38 432 aa15.37■□□□□ 0.05
SMARCD2-207ENST00000578234 INHAP05111 366 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 ZAP70P43403 619 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 MAPKAPK5Q8IW41 473 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 DEFB118Q96PH6 123 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 ASCC2Q9H1I8 757 aaPredicted RBP15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 C1orf115Q9H7X2 142 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 DBNLQ9UJU6 430 aaKnown RBP15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 FLT1P17948 1338 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 MAST2Q6P0Q8 1798 aa15.36■□□□□ 0.05
SMARCD2-207ENST00000578234 EVI5O60447 810 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 BACE1P56817 501 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 DNAJC18Q9H819 358 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 PIH1D3Q9NQM4 214 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 PALD1Q9ULE6 856 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 CDK5RAP2Q96SN8 1893 aa15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 MYO5AQ9Y4I1 1855 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-207ENST00000578234 FOCADQ5VW36 1801 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms