RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 MAGEB6P1A0A0J9YX57 407 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 LIFRP42702 1097 aa20.53■□□□□ 0.88
CMTM3-214ENST00000567572 DHX8Q14562 1220 aaKnown RBP20.53■□□□□ 0.88
CMTM3-214ENST00000567572 NEDD4P46934 1319 aa20.52■□□□□ 0.88
CMTM3-214ENST00000567572 ANO1Q5XXA6 986 aa20.52■□□□□ 0.88
CMTM3-214ENST00000567572 JMYQ8N9B5 988 aa20.52■□□□□ 0.88
CMTM3-214ENST00000567572 NKX2-3Q8TAU0 364 aa20.52■□□□□ 0.88
CMTM3-214ENST00000567572 NSUN4Q96CB9 384 aaKnown RBP20.52■□□□□ 0.88
CMTM3-214ENST00000567572 KIAA1551Q9HCM1 1747 aa20.52■□□□□ 0.88
CMTM3-214ENST00000567572 CMA1P23946 247 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 TMED8Q6PL24 325 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-214ENST00000567572 APOA5Q6Q788 366 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 CYB5R4Q7L1T6 521 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 TIGD1Q96MW7 591 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 CRAMP1Q96RY5 1269 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 LTBP1Q14766 1721 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 BBOX1O75936 387 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 TDO2P48775 406 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 GPSM2P81274 684 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 FLAD1Q8NFF5 587 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 SDF4Q9BRK5 362 aa20.51■□□□□ 0.87
CMTM3-214ENST00000567572 PPP6R2O75170 966 aa20.5■□□□□ 0.87
CMTM3-214ENST00000567572 RCAN1P53805 252 aa20.5■□□□□ 0.87
CMTM3-214ENST00000567572 MECOMQ03112 1051 aa20.5■□□□□ 0.87
CMTM3-214ENST00000567572 ZRSR1Q15695 479 aaKnown RBP20.5■□□□□ 0.87
CMTM3-214ENST00000567572 DHX40Q8IX18 779 aaKnown RBP20.5■□□□□ 0.87
CMTM3-214ENST00000567572 KIAA1468Q9P260 1216 aa20.5■□□□□ 0.87
CMTM3-214ENST00000567572 CLIC4Q9Y696 253 aa20.5■□□□□ 0.87
CMTM3-214ENST00000567572 TACC3Q9Y6A5 838 aa20.5■□□□□ 0.87
CMTM3-214ENST00000567572 B4E1Z4 1266 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 CTDSPL2Q05D32 466 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 SLC39A14Q15043 492 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 CCDC88AQ3V6T2 1871 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 C17orf53Q8N3J3 647 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-214ENST00000567572 STAG1Q8WVM7 1258 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 KRT23Q9C075 422 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 RGS17Q9UGC6 210 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-214ENST00000567572 FAM237AA0A1B0GTK4 181 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 ZBTB43O43298 467 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 IGSF3O75054 1194 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 PRDX5P30044 214 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 NDUFA8P51970 172 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 IGDCC4Q8TDY8 1250 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 WASF1Q92558 559 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 FAM13BQ9NYF5 915 aa20.49■□□□□ 0.87
CMTM3-214ENST00000567572 ZNF804AQ7Z570 1209 aa20.48■□□□□ 0.87
CMTM3-214ENST00000567572 SDR42E1Q8WUS8 393 aa20.48■□□□□ 0.87
CMTM3-214ENST00000567572 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
CMTM3-214ENST00000567572 POLR3DP05423 398 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-214ENST00000567572 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 GSDMDP57764 484 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 DYNLL1P63167 89 aaKnown RBP20.47■□□□□ 0.87
CMTM3-214ENST00000567572 AXDND1Q5T1B0 1012 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-214ENST00000567572 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 LY9Q9HBG7 655 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 ANAPC4Q9UJX5 808 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 DUOX1Q9NRD9 1551 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 A0A1B0GVL5 298 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 KIF28PB7ZC32 967 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 TPM4P67936 248 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 TRIM29Q14134 588 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 OTUD7BQ6GQQ9 843 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 INCENPQ9NQS7 918 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 IMPACTQ9P2X3 320 aa20.47■□□□□ 0.87
CMTM3-214ENST00000567572 UFL1O94874 794 aa20.46■□□□□ 0.87
CMTM3-214ENST00000567572 U2AF2P26368 475 aaKnown RBP eCLIP20.46■□□□□ 0.87
CMTM3-214ENST00000567572 PPARAQ07869 468 aa20.46■□□□□ 0.87
CMTM3-214ENST00000567572 SPTY2D1Q68D10 685 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-214ENST00000567572 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
CMTM3-214ENST00000567572 WDR66Q8TBY9 1149 aa20.46■□□□□ 0.87
CMTM3-214ENST00000567572 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
CMTM3-214ENST00000567572 GOLGA8AA7E2F4 631 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 SLC3A2P08195 630 aaKnown RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 NTRK3Q16288 839 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 KRT40Q6A162 431 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 GPR101Q96P66 508 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 KCND1Q9NSA2 647 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 ZNF202O95125 648 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 NLRP12P59046 1061 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 SART3Q15020 963 aaKnown RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 LRRC8AQ8IWT6 810 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 ELOA2Q8IYF1 753 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 CACTINQ8WUQ7 758 aaKnown RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 RNF41Q9H4P4 317 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-214ENST00000567572 ZSWIM5Q9P217 1185 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 NRBP1Q9UHY1 535 aa20.45■□□□□ 0.86
CMTM3-214ENST00000567572 COL11A2P13942 1736 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-214ENST00000567572 SMTNL1A8MU46 457 aa20.44■□□□□ 0.86
CMTM3-214ENST00000567572 PPFIA3O75145 1194 aa20.44■□□□□ 0.86
CMTM3-214ENST00000567572 PFKFB1P16118 471 aa20.44■□□□□ 0.86
CMTM3-214ENST00000567572 IFNAR1P17181 557 aa20.44■□□□□ 0.86
CMTM3-214ENST00000567572 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
CMTM3-214ENST00000567572 POTEAQ6S8J7 498 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms