RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 NAP1L2Q9ULW6 460 aaPredicted RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 LEMD3Q9Y2U8 911 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 PPEF1O14829 653 aaPredicted RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 CCT2P78371 535 aaKnown RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 DIXDC1Q155Q3 683 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 NAA16Q6N069 864 aaPredicted RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 FLAD1Q8NFF5 587 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 MXD3Q9BW11 206 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 NCOA5Q9HCD5 579 aaKnown RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 KCNQ5Q9NR82 932 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 STK32BQ9NY57 414 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 AATFQ9NY61 560 aaKnown RBP eCLIP7.36□□□□□ -1.23
CHD9-217ENST00000565832 CTNNA3Q9UI47 895 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 TCHHQ07283 1943 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 CHD4Q14839 1912 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 MAGEB6P1A0A0J9YX57 407 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 MINDY4BA8MYZ0 360 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 JAK2O60674 1132 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 GJB2P29033 226 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 ANTXR2P58335 489 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 CYB5R4Q7L1T6 521 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 RIOK1Q9BRS2 568 aaKnown RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
CHD9-217ENST00000565832 CD209Q9NNX6 404 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 DOCK2Q92608 1830 aa7.36□□□□□ -1.23
CHD9-217ENST00000565832 CACNA1SQ13698 1873 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 BAZ2AQ9UIF9 1905 aaKnown RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 B4E1Z4 1266 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 BAG4O95429 457 aaKnown RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 NPR1P16066 1061 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 SYT1P21579 422 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 TDO2P48775 406 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 PSEN2P49810 448 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 SCRN1Q12765 414 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 MCTP1Q6DN14 999 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 C2CD5Q86YS7 1000 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 DDX11Q96FC9 970 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 ZKSCAN3Q9BRR0 538 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 NAPBQ9H115 298 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 BRPF3Q9ULD4 1205 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 SMC3Q9UQE7 1217 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 ATP6V0A2Q9Y487 856 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 NEDD4P46934 1319 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 PRC1O43663 620 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 BRD1O95696 1058 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 PDE6BP35913 854 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 NUCB2P80303 420 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 RRP12Q5JTH9 1297 aaKnown RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 MB21D2Q8IYB1 491 aaPredicted RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 MASTLQ96GX5 879 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 ZSCAN31Q96LW9 406 aaPredicted RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 ALDH8A1Q9H2A2 487 aaPredicted RBP7.35□□□□□ -1.23
CHD9-217ENST00000565832 ZSWIM5Q9P217 1185 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
CHD9-217ENST00000565832 KDM4AO75164 1064 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 PRDM1O75626 825 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 CTDNEP1O95476 244 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 HMGB1P09429 215 aaKnown RBP7.34□□□□□ -1.23
CHD9-217ENST00000565832 RXRAP19793 462 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 PDIA3P30101 505 aaKnown RBP7.34□□□□□ -1.23
CHD9-217ENST00000565832 GTF2IP78347 998 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 ANKRD1Q15327 319 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 ZNF804AQ7Z570 1209 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 MPNDQ8N594 471 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 NCOA7Q8NI08 942 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 ZBED2Q9BTP6 218 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 GDPD2Q9HCC8 539 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 SH2B1Q9NRF2 756 aaPredicted RBP7.34□□□□□ -1.23
CHD9-217ENST00000565832 PODXL2Q9NZ53 605 aa7.34□□□□□ -1.23
CHD9-217ENST00000565832 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.34□□□□□ -1.23
CHD9-217ENST00000565832 SLX4Q8IY92 1834 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 USP17L21D6R901 530 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 F8W031 263 aaPredicted RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 H0YIN7 160 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 TRAK2O60296 914 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 CYP2D6P10635 497 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 ALDH1B1P30837 517 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 MCM5P33992 734 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 RFC5P40937 340 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 BAG6P46379 1132 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 FAM173BQ6P4H8 233 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 DPP8Q6V1X1 898 aaPredicted RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 DZIP1Q86YF9 867 aaKnown RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 GTF3C6Q969F1 213 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 TOMM22Q9NS69 142 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 MOXD2PA6NHM9 499 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 STX6O43752 255 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 PRPF40AO75400 957 aaKnown RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 ZBTB7AO95365 584 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 IL1R1P14778 569 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms