RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CLK2P49760 499 aaKnown RBP7.91□□□□□ -1.14
UBFD1-204ENST00000565634 EIF4A1P60842 406 aaKnown RBP7.91□□□□□ -1.14
UBFD1-204ENST00000565634 CTDSPL2Q05D32 466 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 EXOSC9Q06265 439 aaKnown RBP7.91□□□□□ -1.14
UBFD1-204ENST00000565634 WASHC4Q2M389 1173 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 NBPF9Q3BBW0 867 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 DUSP27Q5VZP5 1158 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 DEFB123Q8N688 67 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 ARMC5Q96C12 935 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 ZNF333Q96JL9 665 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 MXD3Q9BW11 206 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 POLLQ9UGP5 575 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 MAP4K5Q9Y4K4 846 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 LAMB4A4D0S4 1761 aa7.91□□□□□ -1.14
UBFD1-204ENST00000565634 ALPK3Q96L96 1907 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 CDHR2Q9BYE9 1310 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 MAGEB6P1A0A0J9YX57 407 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 FAM181BA6NEQ2 426 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 NTSR2O95665 410 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 ANXA1P04083 346 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 SNRPA1P09661 255 aaKnown RBP7.9□□□□□ -1.14
UBFD1-204ENST00000565634 CRHR2Q13324 411 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 MTFR1Q15390 333 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 VASH1Q7L8A9 365 aaPredicted RBP7.9□□□□□ -1.14
UBFD1-204ENST00000565634 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
UBFD1-204ENST00000565634 CLMNQ96JQ2 1002 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 VPS33BQ9H267 617 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 PRO3102Q9H379 93 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 TSPYL4Q9UJ04 414 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
UBFD1-204ENST00000565634 COL4A1P02462 1669 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 FANCIQ9NVI1 1328 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 VAMP4O75379 141 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 GPSM2P81274 684 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 SREBF2Q12772 1141 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 SKIV2LQ15477 1246 aaKnown RBP7.89□□□□□ -1.15
UBFD1-204ENST00000565634 PROSER3Q2NL68 480 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 SLC9C1Q4G0N8 1177 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 NOM1Q5C9Z4 860 aaKnown RBP7.89□□□□□ -1.15
UBFD1-204ENST00000565634 ZNF34Q8IZ26 560 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 ARHGAP39Q9C0H5 1083 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 IFT57Q9NWB7 429 aa7.89□□□□□ -1.15
UBFD1-204ENST00000565634 ANGEL1Q9UNK9 670 aaKnown RBP7.89□□□□□ -1.15
UBFD1-204ENST00000565634 DUOX1Q9NRD9 1551 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 MYO9BQ13459 2157 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 DOCK3Q8IZD9 2030 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 ZBED9Q6R2W3 1325 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 MAP3K15Q6ZN16 1313 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 BBOX1O75936 387 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 EIF2S2P20042 333 aaKnown RBP7.88□□□□□ -1.15
UBFD1-204ENST00000565634 GNAI1P63096 354 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 SP3Q02447 781 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 G2E3Q7L622 706 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 SHISA4Q96DD7 197 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 ERO1AQ96HE7 468 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 PRDM6Q9NQX0 595 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 ANKRD36CQ5JPF3 1778 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 LAMA3Q16787 3333 aa7.88□□□□□ -1.15
UBFD1-204ENST00000565634 RIC1Q4ADV7 1423 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 IL16Q14005 1332 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 UPP2O95045 317 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 VIL1P09327 827 aaKnown RBP7.87□□□□□ -1.15
UBFD1-204ENST00000565634 FKBP1BP68106 108 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 LMOD3Q0VAK6 560 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 DDX46Q7L014 1031 aaKnown RBP7.87□□□□□ -1.15
UBFD1-204ENST00000565634 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBFD1-204ENST00000565634 CCDC116Q8IYX3 515 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 LRRN4Q8WUT4 740 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 CELF1Q92879 486 aaKnown RBP7.87□□□□□ -1.15
UBFD1-204ENST00000565634 FAM161BQ96MY7 647 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 PTPN18Q99952 460 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 MYOZ2Q9NPC6 264 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 TNNQ9UQP3 1299 aa7.87□□□□□ -1.15
UBFD1-204ENST00000565634 E9PSI1 815 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 ZBTB7BO15156 539 aaPredicted RBP7.86□□□□□ -1.15
UBFD1-204ENST00000565634 BCAR3O75815 825 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 CBLBQ13191 982 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 KIF6Q6ZMV9 814 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 NBPF11Q86T75 865 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 GPKOWQ92917 476 aaPredicted RBP eCLIP7.86□□□□□ -1.156e-6■□□□□ 11.1
UBFD1-204ENST00000565634 TSEN34Q9BSV6 310 aaKnown RBP7.86□□□□□ -1.15
UBFD1-204ENST00000565634 UTP14AQ9BVJ6 771 aaKnown RBP7.86□□□□□ -1.15
UBFD1-204ENST00000565634 CFHR5Q9BXR6 569 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 SNRKQ9NRH2 765 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 COG6Q9Y2V7 657 aa7.86□□□□□ -1.15
UBFD1-204ENST00000565634 VCANP13611 3396 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 ERVV-1B6SEH8 477 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 SASH1O94885 1247 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 RPS12P25398 132 aaKnown RBP7.85□□□□□ -1.15
UBFD1-204ENST00000565634 GRAPQ13588 217 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 SLC10A5Q5PT55 438 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 PPP1R26Q5T8A7 1209 aaPredicted RBP7.85□□□□□ -1.15
UBFD1-204ENST00000565634 ARMC9Q7Z3E5 817 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 LRP10Q7Z4F1 713 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 PPP1R42Q7Z4L9 355 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms