RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
TPM1-227ENST00000560970 FAM163AQ96GL9 167 aaPredicted RBP13.2□□□□□ -0.3
TPM1-227ENST00000560970 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
TPM1-227ENST00000560970 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 ZHX2Q9Y6X8 837 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 GJB1P08034 283 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 MECOMQ03112 1051 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 MYH7P12883 1935 aa13.19□□□□□ -0.3
TPM1-227ENST00000560970 GPR75-ASB3A0A0A6YYF3 556 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
TPM1-227ENST00000560970 RHBDL3P58872 404 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 TIMM10P62072 90 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 GSTO1P78417 241 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 TFCP2Q12800 502 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 UBE2Q1Q7Z7E8 422 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 RNF208Q9H0X6 261 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
TPM1-227ENST00000560970 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
TPM1-227ENST00000560970 GABRQQ9UN88 632 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 A0A0G2JMZ2 1700 aa13.18□□□□□ -0.3
TPM1-227ENST00000560970 TBC1D12O60347 775 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
TPM1-227ENST00000560970 MAP4K4O95819 1239 aaPredicted RBP13.17□□□□□ -0.3
TPM1-227ENST00000560970 INHAP05111 366 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
TPM1-227ENST00000560970 IRF5Q13568 498 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
TPM1-227ENST00000560970 ZNF384Q8TF68 577 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
TPM1-227ENST00000560970 HMG20BQ9P0W2 317 aa13.17□□□□□ -0.3
TPM1-227ENST00000560970 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 ADCY3O60266 1144 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 FLT3LGP49771 235 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
TPM1-227ENST00000560970 PXYLP1Q8TE99 480 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 U2AF1L4Q8WU68 220 aaKnown RBP13.16□□□□□ -0.3
TPM1-227ENST00000560970 NSUN4Q96CB9 384 aaKnown RBP13.16□□□□□ -0.3
TPM1-227ENST00000560970 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPM1-227ENST00000560970 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
TPM1-227ENST00000560970 ELNP15502 786 aa13.15□□□□□ -0.3
TPM1-227ENST00000560970 TREML2Q5T2D2 321 aa13.15□□□□□ -0.3
TPM1-227ENST00000560970 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
TPM1-227ENST00000560970 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.3
TPM1-227ENST00000560970 DPF3Q92784 378 aa13.15□□□□□ -0.3
TPM1-227ENST00000560970 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
TPM1-227ENST00000560970 NOP58Q9Y2X3 529 aaKnown RBP13.15□□□□□ -0.3
TPM1-227ENST00000560970 SURF6O75683 361 aaKnown RBP13.14□□□□□ -0.31
TPM1-227ENST00000560970 LDHCP07864 332 aa13.14□□□□□ -0.31
TPM1-227ENST00000560970 MCAMP43121 646 aa13.14□□□□□ -0.31
TPM1-227ENST00000560970 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
TPM1-227ENST00000560970 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
TPM1-227ENST00000560970 COA7Q96BR5 231 aa13.14□□□□□ -0.31
TPM1-227ENST00000560970 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
TPM1-227ENST00000560970 PAK6Q9NQU5 681 aaPredicted RBP13.14□□□□□ -0.31
TPM1-227ENST00000560970 RAI14Q9P0K7 980 aa13.14□□□□□ -0.31
TPM1-227ENST00000560970 HERC5Q9UII4 1024 aaKnown RBP13.14□□□□□ -0.31
TPM1-227ENST00000560970 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
TPM1-227ENST00000560970 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 SGPL1O95470 568 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 CAPN2P17655 700 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 GCLCP48506 637 aaPredicted RBP13.13□□□□□ -0.31
TPM1-227ENST00000560970 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPM1-227ENST00000560970 TEX11Q8IYF3 940 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 AS3MTQ9HBK9 375 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
TPM1-227ENST00000560970 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
TPM1-227ENST00000560970 LTBP2Q14767 1821 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 CAP2P40123 477 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 HMGCS2P54868 508 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 SPP2Q13103 211 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
TPM1-227ENST00000560970 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
TPM1-227ENST00000560970 DEFB118Q96PH6 123 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 FLT1P17948 1338 aa13.12□□□□□ -0.31
TPM1-227ENST00000560970 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms