RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 KIF22Q14807 665 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 TREML2Q5T2D2 321 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
USP3-212ENST00000559276 ABCF2Q9UG63 623 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 ALPK3Q96L96 1907 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 MYPNQ86TC9 1320 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 DOCK3Q8IZD9 2030 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 MAST2Q6P0Q8 1798 aa7.18□□□□□ -1.26
USP3-212ENST00000559276 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 TBC1D12O60347 775 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 CTNND1O60716 968 aaKnown RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 BCAR3O75815 825 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 FMNL1O95466 1100 aaPredicted RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 GJB1P08034 283 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 CCL5P13501 91 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 ARID4AP29374 1257 aaPredicted RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 MCAMP43121 646 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 GJA8P48165 433 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 PICALMQ13492 652 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 BECN1Q14457 450 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 C8orf34Q49A92 452 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 DZIP1Q86YF9 867 aaKnown RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 ZGPATQ8N5A5 531 aaKnown RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 PARK7Q99497 189 aaKnown RBP7.17□□□□□ -1.26
USP3-212ENST00000559276 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 PRO3102Q9H379 93 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 SLC45A1Q9Y2W3 748 aa7.17□□□□□ -1.26
USP3-212ENST00000559276 TRIM75PA6NK02 468 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 GNAI3P08754 354 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 ELNP15502 786 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 FLT3LGP49771 235 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 FCGRTP55899 365 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 POLA2Q14181 598 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 MVPQ14764 893 aaKnown RBP7.16□□□□□ -1.26
USP3-212ENST00000559276 TMEM132AQ24JP5 1023 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 SHROOM1Q2M3G4 852 aaPredicted RBP7.16□□□□□ -1.26
USP3-212ENST00000559276 POTEEQ6S8J3 1075 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 FASTKD5Q7L8L6 764 aaKnown RBP7.16□□□□□ -1.26
USP3-212ENST00000559276 ADGRA1Q86SQ6 560 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 ZSCAN29Q8IWY8 852 aaPredicted RBP7.16□□□□□ -1.26
USP3-212ENST00000559276 SPATA5Q8NB90 893 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 RAET1EQ8TD07 263 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 OSBPL5Q9H0X9 879 aaPredicted RBP7.16□□□□□ -1.26
USP3-212ENST00000559276 DNAJC18Q9H819 358 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 PICK1Q9NRD5 415 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 AGTPBP1Q9UPW5 1226 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
USP3-212ENST00000559276 CEP290O15078 2479 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 ADCY3O60266 1144 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 PEX10O60683 326 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 HOXD10P28358 340 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 IRF5Q13568 498 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 SPTY2D1Q68D10 685 aaPredicted RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 ATF7IPQ6VMQ6 1270 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 GADL1Q6ZQY3 521 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 METTL16Q86W50 562 aaKnown RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 ANKRD13CQ8N6S4 541 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 SLAIN1Q8ND83 568 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 SH3RF3Q8TEJ3 882 aaPredicted RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 U2AF1L4Q8WU68 220 aaKnown RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 CLUAP1Q96AJ1 413 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 NEUROD6Q96NK8 337 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 RNF208Q9H0X6 261 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 PAK6Q9NQU5 681 aaPredicted RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 RBM27Q9P2N5 1060 aaKnown RBP7.15□□□□□ -1.26
USP3-212ENST00000559276 HDAC5Q9UQL6 1122 aa7.15□□□□□ -1.26
USP3-212ENST00000559276 LAMA3Q16787 3333 aa7.15□□□□□ -1.27
USP3-212ENST00000559276 SGPL1O95470 568 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 GNAI2P04899 355 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 INHAP05111 366 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 CYP2E1P05181 493 aaPredicted RBP7.14□□□□□ -1.27
USP3-212ENST00000559276 CAP2P40123 477 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 MNX1P50219 401 aaPredicted RBP7.14□□□□□ -1.27
USP3-212ENST00000559276 TRIM32Q13049 653 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 SPP2Q13103 211 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 CHRDL2Q6WN34 429 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 SLF2Q8IX21 1173 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 TMEM57Q8N5G2 664 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 PROCA1Q8NCQ7 364 aaPredicted RBP7.14□□□□□ -1.27
USP3-212ENST00000559276 IL27Q8NEV9 243 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 SSH3Q8TE77 659 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 PXYLP1Q8TE99 480 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 DBNDD2Q9BQY9 259 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 UPF2Q9HAU5 1272 aaKnown RBP7.14□□□□□ -1.27
USP3-212ENST00000559276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP3-212ENST00000559276 SNRKQ9NRH2 765 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 GJD2Q9UKL4 321 aa7.14□□□□□ -1.27
USP3-212ENST00000559276 DDX60LQ5H9U9 1706 aaKnown RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 FLT1P17948 1338 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 TNPO2O14787 897 aaKnown RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 ZBTB7BO15156 539 aaPredicted RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 MAP4K4O95819 1239 aaPredicted RBP7.13□□□□□ -1.27
USP3-212ENST00000559276 LDHCP07864 332 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 RLBP1P12271 317 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 HMGCS2P54868 508 aa7.13□□□□□ -1.27
USP3-212ENST00000559276 PPP4CP60510 307 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms