RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 EDC3Q96F86 508 aaKnown RBP19.01■□□□□ 0.63
RABGGTA-205ENST00000558534 FSD1Q9BTV5 496 aa19.01■□□□□ 0.63
RABGGTA-205ENST00000558534 PRDM10Q9NQV6 1147 aa19.01■□□□□ 0.63
RABGGTA-205ENST00000558534 ATAD5Q96QE3 1844 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
RABGGTA-205ENST00000558534 IGHDP01880 384 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 GNAT2P19087 354 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 SH3BP5LQ7L8J4 393 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 SCYL3Q8IZE3 742 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 APPBP2Q92624 585 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 EHD4Q9H223 541 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 ZBTB4Q9P1Z0 1013 aaPredicted RBP19■□□□□ 0.63
RABGGTA-205ENST00000558534 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
RABGGTA-205ENST00000558534 FOXN1O15353 648 aa18.99■□□□□ 0.63
RABGGTA-205ENST00000558534 MBD4O95243 580 aa18.99■□□□□ 0.63
RABGGTA-205ENST00000558534 CETPP11597 493 aa18.99■□□□□ 0.63
RABGGTA-205ENST00000558534 SNAPC2Q13487 334 aa18.99■□□□□ 0.63
RABGGTA-205ENST00000558534 ZKSCAN4Q969J2 545 aaPredicted RBP18.99■□□□□ 0.63
RABGGTA-205ENST00000558534 OTUD5Q96G74 571 aa18.99■□□□□ 0.63
RABGGTA-205ENST00000558534 DDX60LQ5H9U9 1706 aaKnown RBP18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 POLR3DP05423 398 aaPredicted RBP18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 INPP5BP32019 993 aa18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 IFFO2Q5TF58 517 aa18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 TSHZ3Q63HK5 1081 aa18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 OSBPL3Q9H4L5 887 aa18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 ZCCHC17Q9NP64 241 aaKnown RBP18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 SERPINB13Q9UIV8 391 aa18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 MYH8P13535 1937 aa18.98■□□□□ 0.63
RABGGTA-205ENST00000558534 TESPA1A2RU30 521 aaPredicted RBP18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 PHF20L1A8MW92 1017 aa18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 OTUD7AQ8TE49 926 aaPredicted RBP18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 ARMT1Q9H993 441 aa18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 AS3MTQ9HBK9 375 aa18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 RNF186Q9NXI6 227 aa18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 PALD1Q9ULE6 856 aa18.97■□□□□ 0.63
RABGGTA-205ENST00000558534 CXCL11O14625 94 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 ASNSP08243 561 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 IFNL1Q8IU54 200 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 LCORLQ8N3X6 602 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 ZIC5Q96T25 663 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 CFHR5Q9BXR6 569 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 MCM9Q9NXL9 1143 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 SLC4A4Q9Y6R1 1079 aa18.96■□□□□ 0.63
RABGGTA-205ENST00000558534 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 CCL15-CCL14A0A0B4J2E2 113 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 TRIM6-TRIM34B2RNG4 842 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 HIP1O00291 1037 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 TRPA1O75762 1119 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 HSPA8P11142 646 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 CAP2P40123 477 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 CCL15Q16663 113 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 NOM1Q5C9Z4 860 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 FASTKD5Q7L8L6 764 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 NACAP1Q9BZK3 213 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 DCP1AQ9NPI6 582 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 ARPP21Q9UBL0 812 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
RABGGTA-205ENST00000558534 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
RABGGTA-205ENST00000558534 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-205ENST00000558534 IRF6O14896 467 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 PTPRAP18433 802 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 LBX1P52954 281 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 MFAP1P55081 439 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 PLEKHM2Q8IWE5 1019 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 SDR42E1Q8WUS8 393 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 PUS7LQ9H0K6 701 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 ZNF287Q9HBT7 754 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 ZHX2Q9Y6X8 837 aa18.93■□□□□ 0.62
RABGGTA-205ENST00000558534 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 GPAA1O43292 621 aa18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 GJA5P36382 358 aa18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 ZMYM1Q5SVZ6 1142 aa18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 CENPQQ7L2Z9 268 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 MS4A4AQ96JQ5 239 aa18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 STRBPQ96SI9 672 aaKnown RBP18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 HELLSQ9NRZ9 838 aa18.92■□□□□ 0.62
RABGGTA-205ENST00000558534 PHIPQ8WWQ0 1821 aa18.91■□□□□ 0.62
RABGGTA-205ENST00000558534 RILPL2Q969X0 211 aa18.91■□□□□ 0.62
RABGGTA-205ENST00000558534 ZFYVE28Q9HCC9 887 aa18.91■□□□□ 0.62
RABGGTA-205ENST00000558534 PTPRFP10586 1907 aa18.91■□□□□ 0.62
RABGGTA-205ENST00000558534 APPP05067 770 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 ANKRD23Q86SG2 305 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 ZNF280CQ8ND82 737 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 AFG3L2Q9Y4W6 797 aa18.9■□□□□ 0.62
RABGGTA-205ENST00000558534 FAM196BA6NMK8 535 aa18.89■□□□□ 0.61
RABGGTA-205ENST00000558534 PATL2C9JE40 543 aaKnown RBP18.89■□□□□ 0.61
RABGGTA-205ENST00000558534 SLC3A2P08195 630 aaKnown RBP18.89■□□□□ 0.61
RABGGTA-205ENST00000558534 TDO2P48775 406 aa18.89■□□□□ 0.61
RABGGTA-205ENST00000558534 ARHGEF6Q15052 776 aa18.89■□□□□ 0.61
RABGGTA-205ENST00000558534 SBK1Q52WX2 424 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms