RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 DDTLA6NHG4 134 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-211ENST00000557623 FOXN1O15353 648 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
SLIRP-211ENST00000557623 MX1P20591 662 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 INHBEP58166 350 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 DYNLL1P63167 89 aaKnown RBP15.11■□□□□ 0.01
SLIRP-211ENST00000557623 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-211ENST00000557623 SREBF2Q12772 1141 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 VGLL4Q14135 290 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 MIGA1Q8NAN2 632 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 ELP3Q9H9T3 547 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 BMP2KQ9NSY1 1161 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-211ENST00000557623 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-211ENST00000557623 ZNF112Q9UJU3 913 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 DOCK1Q14185 1865 aa15.11■□□□□ 0.01
SLIRP-211ENST00000557623 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-211ENST00000557623 RIOK3O14730 519 aaKnown RBP15.1■□□□□ 0.01
SLIRP-211ENST00000557623 TBC1D12O60347 775 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 IGHDP01880 384 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 ADD2P35612 726 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 USP5P45974 858 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 TM4SF4P48230 202 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 MKRN3Q13064 507 aaKnown RBP15.1■□□□□ 0.01
SLIRP-211ENST00000557623 LRRFIP1Q32MZ4 808 aaKnown RBP15.1■□□□□ 0.01
SLIRP-211ENST00000557623 ASTLQ6HA08 431 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-211ENST00000557623 OPTNQ96CV9 577 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 TMEM106CQ9BVX2 250 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 SAGE1Q9NXZ1 904 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 FLT1P17948 1338 aa15.1■□□□□ 0.01
SLIRP-211ENST00000557623 SIPA1L1O43166 1804 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 TCRBV5S4A2TA0A5A2 114 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 ATMINO43313 823 aaPredicted RBP15.09■□□□□ 0.01
SLIRP-211ENST00000557623 UBE3CQ15386 1083 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 MAPKAPK5Q8IW41 473 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 KBTBD3Q8NAB2 608 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
SLIRP-211ENST00000557623 CRNKL1Q9BZJ0 848 aaKnown RBP15.09■□□□□ 0.01
SLIRP-211ENST00000557623 PI4KBQ9UBF8 816 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 SNCAIPQ9Y6H5 919 aa15.09■□□□□ 0.01
SLIRP-211ENST00000557623 SPDYE5A6NIY4 337 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 TTLL13PA6NNM8 815 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 HLA-DOAP06340 250 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 INPP5BP32019 993 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 PDAP1Q13442 181 aaKnown RBP15.08■□□□□ 0
SLIRP-211ENST00000557623 NOL9Q5SY16 702 aaKnown RBP15.08■□□□□ 0
SLIRP-211ENST00000557623 B4GALNT3Q6L9W6 998 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 PI4K2BQ8TCG2 481 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 OTUD7AQ8TE49 926 aaPredicted RBP15.08■□□□□ 0
SLIRP-211ENST00000557623 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
SLIRP-211ENST00000557623 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.08■□□□□ 0
SLIRP-211ENST00000557623 STAP2Q9UGK3 403 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 HERC5Q9UII4 1024 aaKnown RBP15.08■□□□□ 0
SLIRP-211ENST00000557623 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 SALL3Q9BXA9 1300 aa15.08■□□□□ 0
SLIRP-211ENST00000557623 DDX60LQ5H9U9 1706 aaKnown RBP15.07■□□□□ 0
SLIRP-211ENST00000557623 PHF20L1A8MW92 1017 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 ZFYP08048 801 aaPredicted RBP15.07■□□□□ 0
SLIRP-211ENST00000557623 HSPA8P11142 646 aaKnown RBP15.07■□□□□ 0
SLIRP-211ENST00000557623 NUCB1Q02818 461 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 PPATQ06203 517 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 CHD1LQ86WJ1 897 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 FOXP4Q8IVH2 680 aaPredicted RBP15.07■□□□□ 0
SLIRP-211ENST00000557623 OTUD5Q96G74 571 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 TRIM34Q9BYJ4 488 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 LNPKQ9C0E8 428 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 RNF186Q9NXI6 227 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 MYH8P13535 1937 aa15.07■□□□□ 0
SLIRP-211ENST00000557623 PHIPQ8WWQ0 1821 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 BAZ2AQ9UIF9 1905 aaKnown RBP15.06■□□□□ 0
SLIRP-211ENST00000557623 CTNND1O60716 968 aaKnown RBP15.06■□□□□ 0
SLIRP-211ENST00000557623 ALDH1A1P00352 501 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 GJA5P36382 358 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 PSEN1P49768 467 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 GTF2A2P52657 109 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 PDE1AP54750 535 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 PPIL2Q13356 520 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 PICK1Q9NRD5 415 aa15.06■□□□□ 0
SLIRP-211ENST00000557623 PCNTO95613 3336 aa15.05■□□□□ -0
SLIRP-211ENST00000557623 TESPA1A2RU30 521 aaPredicted RBP15.05■□□□□ -0
SLIRP-211ENST00000557623 RNF113AO15541 343 aaKnown RBP15.05■□□□□ -0
SLIRP-211ENST00000557623 TRPA1O75762 1119 aa15.05■□□□□ -0
SLIRP-211ENST00000557623 LBX1P52954 281 aa15.05■□□□□ -0
SLIRP-211ENST00000557623 TTC6Q86TZ1 520 aa15.05■□□□□ -0
SLIRP-211ENST00000557623 LCORLQ8N3X6 602 aa15.05■□□□□ -0
SLIRP-211ENST00000557623 CRACR2BQ8N4Y2 399 aaPredicted RBP15.05■□□□□ -0
SLIRP-211ENST00000557623 RNF25Q96BH1 459 aaPredicted RBP15.05■□□□□ -0
SLIRP-211ENST00000557623 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
SLIRP-211ENST00000557623 PALD1Q9ULE6 856 aa15.05■□□□□ -0
SLIRP-211ENST00000557623 PTPRFP10586 1907 aa15.04■□□□□ -0
SLIRP-211ENST00000557623 MBD4O95243 580 aa15.04■□□□□ -0
SLIRP-211ENST00000557623 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms