RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PEX10O60683 326 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 CYP2E1P05181 493 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 ELNP15502 786 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 PRMT2P55345 433 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 SPP2Q13103 211 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 TNNI3KQ59H18 835 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 MIER1Q8N108 512 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 SSH3Q8TE77 659 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 AATFQ9NY61 560 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 TLR7Q9NYK1 1049 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 LRP2BPQ9P2M1 347 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 FPGT-TNNI3KV9GXZ4 949 aa14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 RANBP2P49792 3224 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-212ENST00000551111 LDHCP07864 332 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 HOXD10P28358 340 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 FLT3LGP49771 235 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 FCGRTP55899 365 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 ANKRD13CQ8N6S4 541 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 UNC93B1Q9H1C4 597 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 DNAJC18Q9H819 358 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 NDUFB9Q9Y6M9 179 aa14.22□□□□□ -0.13
PRPF40B-212ENST00000551111 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 CAP2P40123 477 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 ZAP70P43403 619 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 HMGCS2P54868 508 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 GSTO1P78417 241 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 TTC39AQ5SRH9 613 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 MAPKAPK5Q8IW41 473 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 TGFBRAP1Q8WUH2 860 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 CCDC8Q9H0W5 538 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 RNF208Q9H0X6 261 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 PCDH10Q9P2E7 1040 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 BIN2Q9UBW5 565 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 SLC45A1Q9Y2W3 748 aa14.21□□□□□ -0.13
PRPF40B-212ENST00000551111 ZBTB7BO15156 539 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 ADCY3O60266 1144 aa14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 GJB1P08034 283 aa14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 GJA8P48165 433 aa14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 NAA16Q6N069 864 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 SMCR8Q8TEV9 937 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 EAF2Q96CJ1 260 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 GPR108Q9NPR9 543 aa14.2□□□□□ -0.14
PRPF40B-212ENST00000551111 TNPO2O14787 897 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 PPP4CP60510 307 aa14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 OS9Q13438 667 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 ZNF280CQ8ND82 737 aa14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 SAP30BPQ9UHR5 308 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 PALD1Q9ULE6 856 aa14.19□□□□□ -0.14
PRPF40B-212ENST00000551111 FLT1P17948 1338 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 GDF11O95390 407 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 INHAP05111 366 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 POTEEQ6S8J3 1075 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 ITPRIPQ8IWB1 547 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 PROCA1Q8NCQ7 364 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 ASCC2Q9H1I8 757 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 ANTXR1Q9H6X2 564 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-212ENST00000551111 USP17L5A8MUK1 530 aa14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 MAP4K4O95819 1239 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 TRIM32Q13049 653 aa14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 DPF3Q92784 378 aa14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 PI4KBQ9UBF8 816 aa14.17□□□□□ -0.14
PRPF40B-212ENST00000551111 SGPL1O95470 568 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 UBXN2AP68543 259 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 MTMR2Q13614 643 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 FAM110CQ1W6H9 321 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 SH3D19Q5HYK7 790 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 ZNF512BQ96KM6 892 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 P2RX7Q99572 595 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 HERC5Q9UII4 1024 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 GJD2Q9UKL4 321 aa14.16□□□□□ -0.14
PRPF40B-212ENST00000551111 BAZ2AQ9UIF9 1905 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 BAG3O95817 575 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 CYP7A1P22680 504 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 EVX2Q03828 476 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 IRF5Q13568 498 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 CEP85Q6P2H3 762 aa14.15□□□□□ -0.14
PRPF40B-212ENST00000551111 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms