RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 KRTAP4-8Q9BYQ9 185 aa10.6□□□□□ -0.71
CHKA-205ENST00000530730 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
CHKA-205ENST00000530730 STOML1Q9UBI4 398 aa10.6□□□□□ -0.71
CHKA-205ENST00000530730 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
CHKA-205ENST00000530730 ADGRF5Q8IZF2 1346 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 MEGF11A6BM72 1044 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
CHKA-205ENST00000530730 TRPA1O75762 1119 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 RGL3Q3MIN7 710 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 VN1R5Q7Z5H4 357 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 UTP4Q969X6 686 aaKnown RBP10.59□□□□□ -0.71
CHKA-205ENST00000530730 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
CHKA-205ENST00000530730 CDK12Q9NYV4 1490 aaPredicted RBP10.59□□□□□ -0.71
CHKA-205ENST00000530730 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 CARNS1A5YM72 827 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 ICMTO60725 284 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 ABL1P00519 1130 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 PEAR1Q5VY43 1037 aaPredicted RBP10.58□□□□□ -0.72
CHKA-205ENST00000530730 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
CHKA-205ENST00000530730 WAPLQ7Z5K2 1190 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 MPHOSPH9Q99550 1183 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 STK26Q9P289 416 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 HIF3AQ9Y2N7 669 aa10.58□□□□□ -0.72
CHKA-205ENST00000530730 KIF1BO60333 1816 aa10.57□□□□□ -0.72
CHKA-205ENST00000530730 ZNF211Q13398 564 aaPredicted RBP10.57□□□□□ -0.72
CHKA-205ENST00000530730 IKBKEQ14164 716 aa10.57□□□□□ -0.72
CHKA-205ENST00000530730 NALCNQ8IZF0 1738 aa10.57□□□□□ -0.72
CHKA-205ENST00000530730 PRAG1Q86YV5 1406 aa10.57□□□□□ -0.72
CHKA-205ENST00000530730 TMEM132EQ6IEE7 984 aa10.56□□□□□ -0.72
CHKA-205ENST00000530730 RUSC1Q9BVN2 902 aa10.56□□□□□ -0.72
CHKA-205ENST00000530730 SOX1O00570 391 aaPredicted RBP10.55□□□□□ -0.72
CHKA-205ENST00000530730 CD97P48960 835 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 NLRP12P59046 1061 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
CHKA-205ENST00000530730 ECM1Q16610 540 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 CLEC10AQ8IUN9 316 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 FAM20CQ8IXL6 584 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 SLC7A3Q8WY07 619 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
CHKA-205ENST00000530730 RGS12O14924 1447 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 NPHP3Q7Z494 1330 aa10.55□□□□□ -0.72
CHKA-205ENST00000530730 NFIAQ12857 509 aa10.54□□□□□ -0.72
CHKA-205ENST00000530730 RNF43Q68DV7 783 aa10.54□□□□□ -0.72
CHKA-205ENST00000530730 SPATA31E1Q6ZUB1 1445 aa10.54□□□□□ -0.72
CHKA-205ENST00000530730 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
CHKA-205ENST00000530730 ANO2Q9NQ90 1003 aa10.54□□□□□ -0.72
CHKA-205ENST00000530730 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
CHKA-205ENST00000530730 ABCC11Q96J66 1382 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 CCDC144AA2RUR9 1427 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 ESRRAP11474 423 aaPredicted RBP10.53□□□□□ -0.72
CHKA-205ENST00000530730 PREPP48147 710 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 GALNT12Q8IXK2 581 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 FAM83CQ9BQN1 747 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 SUGCTQ9HAC7 445 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 LAMC1P11047 1609 aa10.53□□□□□ -0.72
CHKA-205ENST00000530730 ANKRD30BQ9BXX2 1392 aa10.52□□□□□ -0.72
CHKA-205ENST00000530730 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.72
CHKA-205ENST00000530730 SART1O43290 800 aaKnown RBP10.52□□□□□ -0.73
CHKA-205ENST00000530730 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 FDX2Q6P4F2 183 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 ZDHHC13Q8IUH4 622 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 DBNDD2Q9BQY9 259 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 TMPRSS13Q9BYE2 586 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 LATS2Q9NRM7 1088 aa10.52□□□□□ -0.73
CHKA-205ENST00000530730 KIAA1324LA8MWY0 1029 aaPredicted RBP10.51□□□□□ -0.73
CHKA-205ENST00000530730 NEFLP07196 543 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 CCNJLQ8IV13 435 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 TRIM42Q8IWZ5 723 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 SMG8Q8ND04 991 aaKnown RBP10.51□□□□□ -0.73
CHKA-205ENST00000530730 CITED4Q96RK1 184 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 C14orf93Q9H972 538 aaKnown RBP10.51□□□□□ -0.73
CHKA-205ENST00000530730 PCMTD2Q9NV79 361 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 BRPF3Q9ULD4 1205 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 PPLO60437 1756 aa10.51□□□□□ -0.73
CHKA-205ENST00000530730 TECPR2O15040 1411 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 PXDNQ92626 1479 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 LOC100289279A0A1B0GTE1 492 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 H3BRB1 525 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 BMP3P12645 472 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 ARHGAP4P98171 946 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 GLYCTKQ8IVS8 523 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 ASAP3Q8TDY4 903 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 TUT1Q9H6E5 874 aaKnown RBP10.5□□□□□ -0.73
CHKA-205ENST00000530730 ATRNO75882 1429 aa10.5□□□□□ -0.73
CHKA-205ENST00000530730 MYOM2P54296 1465 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 HMX2A2RU54 273 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 COBLO75128 1261 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 TIAF1O95411 115 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 SERPINB4P48594 390 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 KRT28Q7Z3Y7 464 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 PIK3C2GO75747 1445 aa10.49□□□□□ -0.73
CHKA-205ENST00000530730 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms