RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 LRRIQ1Q96JM4 1722 aa5.94□□□□□ -1.46
C11orf54-208ENST00000530279 REREQ9P2R6 1566 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 A0A0G2JLL6 359 aaPredicted RBP5.93□□□□□ -1.46
C11orf54-208ENST00000530279 FAM87AP0C7U9 286 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 ELOAQ14241 798 aaKnown RBP5.93□□□□□ -1.46
C11orf54-208ENST00000530279 ARHGAP27Q6ZUM4 889 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 ANKMY2Q8IV38 441 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 AFAP1Q8N556 730 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 BORCS6Q96GS4 357 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 KIRREL1Q96J84 757 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 DIRC2Q96SL1 478 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 ZCCHC4Q9H5U6 513 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 NSUN3Q9H649 340 aaKnown RBP5.93□□□□□ -1.46
C11orf54-208ENST00000530279 NCOA2Q15596 1464 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 ABCC1P33527 1531 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 ARHGEF40Q8TER5 1519 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 FRMPD1Q5SYB0 1578 aa5.93□□□□□ -1.46
C11orf54-208ENST00000530279 C9orf84Q5VXU9 1444 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 MBD5Q9P267 1494 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 SRPK2P78362 688 aaKnown RBP5.92□□□□□ -1.46
C11orf54-208ENST00000530279 AKAP4Q5JQC9 854 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 PRRT2Q7Z6L0 340 aaPredicted RBP5.92□□□□□ -1.46
C11orf54-208ENST00000530279 NXPE3Q969Y0 559 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 GSX1Q9H4S2 264 aaPredicted RBP5.92□□□□□ -1.46
C11orf54-208ENST00000530279 ELP3Q9H9T3 547 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 SMG5Q9UPR3 1016 aaKnown RBP5.92□□□□□ -1.46
C11orf54-208ENST00000530279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.92□□□□□ -1.46
C11orf54-208ENST00000530279 AGLP35573 1532 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 ZFYVE16Q7Z3T8 1539 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 SPAG9O60271 1321 aaKnown RBP5.92□□□□□ -1.46
C11orf54-208ENST00000530279 PITPNM2Q9BZ72 1349 aa5.92□□□□□ -1.46
C11orf54-208ENST00000530279 TRAPPC8Q9Y2L5 1435 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 SUPT6HQ7KZ85 1726 aaKnown RBP5.91□□□□□ -1.46
C11orf54-208ENST00000530279 CDC42BPBQ9Y5S2 1711 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 CEACAM5P06731 702 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 MED14OSP0DP75 135 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 ESRRAP11474 423 aaPredicted RBP5.91□□□□□ -1.46
C11orf54-208ENST00000530279 FAM26DQ5JW98 314 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 PDE12Q6L8Q7 609 aaKnown RBP5.91□□□□□ -1.46
C11orf54-208ENST00000530279 GZF1Q9H116 711 aaPredicted RBP5.91□□□□□ -1.46
C11orf54-208ENST00000530279 RAD18Q9NS91 495 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 CNTN3Q9P232 1028 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 AP4E1Q9UPM8 1137 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 U3KQE9 123 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 CDC42BPAQ5VT25 1732 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 MYOM3Q5VTT5 1437 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 YEATS2Q9ULM3 1422 aa5.91□□□□□ -1.46
C11orf54-208ENST00000530279 ARHGEF12Q9NZN5 1544 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 TSPY4P0CV99 314 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 TSPY10P0CW01 314 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 BMP7P18075 431 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 CES1P23141 567 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 ZAP70P43403 619 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 ZP2Q05996 745 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 NFIXQ14938 502 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 HP1BP3Q5SSJ5 553 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-208ENST00000530279 KANK4Q5T7N3 995 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-208ENST00000530279 GPR152Q8TDT2 470 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 PLAGL2Q9UPG8 496 aa5.9□□□□□ -1.46
C11orf54-208ENST00000530279 ITSN2Q9NZM3 1697 aa5.9□□□□□ -1.47
C11orf54-208ENST00000530279 HECW2Q9P2P5 1572 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 FAM196BA6NMK8 535 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 GLDCP23378 1020 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 HNRNPMP52272 730 aaKnown RBP eCLIP5.89□□□□□ -1.47
C11orf54-208ENST00000530279 OXCT1P55809 520 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 LINC00310P59036 64 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 NFKB2Q00653 900 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 NRSN2Q9GZP1 204 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 IRF2BPLQ9H1B7 796 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 MTMR7Q9Y216 660 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 SNX11Q9Y5W9 270 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 ARID4BQ4LE39 1312 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-208ENST00000530279 CNTLNQ9NXG0 1405 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 CCDC141Q6ZP82 1450 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 ARHGEF5Q12774 1597 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 SAMD9LQ8IVG5 1584 aa5.89□□□□□ -1.47
C11orf54-208ENST00000530279 ETV2O00321 342 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-208ENST00000530279 C16orf46Q6P387 395 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 CYFIP1Q7L576 1253 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 ASB11Q8WXH4 323 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 SAP130Q9H0E3 1048 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 DHX29Q7Z478 1369 aaKnown RBP5.88□□□□□ -1.47
C11orf54-208ENST00000530279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.88□□□□□ -1.47
C11orf54-208ENST00000530279 SYCP2Q9BX26 1530 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 FAM135AQ9P2D6 1515 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 ADAMTSL3P82987 1691 aa5.88□□□□□ -1.47
C11orf54-208ENST00000530279 SETD1BQ9UPS6 1966 aaKnown RBP5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L15C9J2P7 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L10C9JJH3 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L13C9JLJ4 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L12C9JPN9 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L11C9JVI0 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L21D6R901 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L18D6R9N7 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L22D6RA61 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L17D6RBQ6 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L19D6RCP7 530 aa5.87□□□□□ -1.47
C11orf54-208ENST00000530279 USP17L20D6RJB6 530 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms