RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-203ENST00000525918 COA7Q96BR5 231 aa13.18□□□□□ -0.3
VPS26B-203ENST00000525918 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
VPS26B-203ENST00000525918 UNC93B1Q9H1C4 597 aa13.18□□□□□ -0.3
VPS26B-203ENST00000525918 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
VPS26B-203ENST00000525918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-203ENST00000525918 CDK5RAP2Q96SN8 1893 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 GNAI2P04899 355 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-203ENST00000525918 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
VPS26B-203ENST00000525918 PI16Q6UXB8 463 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 TBC1D9Q6ZT07 1266 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-203ENST00000525918 ANKRD13CQ8N6S4 541 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-203ENST00000525918 NR2E3Q9Y5X4 410 aa13.17□□□□□ -0.3
VPS26B-203ENST00000525918 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
VPS26B-203ENST00000525918 INHAP05111 366 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 ELNP15502 786 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 CAP2P40123 477 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
VPS26B-203ENST00000525918 SPP2Q13103 211 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS26B-203ENST00000525918 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
VPS26B-203ENST00000525918 HERC5Q9UII4 1024 aaKnown RBP13.16□□□□□ -0.3
VPS26B-203ENST00000525918 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
VPS26B-203ENST00000525918 TFRCP02786 760 aaKnown RBP13.15□□□□□ -0.3
VPS26B-203ENST00000525918 UQCRFS1P1P0C7P4 283 aa13.15□□□□□ -0.3
VPS26B-203ENST00000525918 TRIM27P14373 513 aa13.15□□□□□ -0.3
VPS26B-203ENST00000525918 MCAMP43121 646 aa13.15□□□□□ -0.3
VPS26B-203ENST00000525918 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
VPS26B-203ENST00000525918 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
VPS26B-203ENST00000525918 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
VPS26B-203ENST00000525918 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
VPS26B-203ENST00000525918 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
VPS26B-203ENST00000525918 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.31
VPS26B-203ENST00000525918 SIPA1L1O43166 1804 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 BAG3O95817 575 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 HMGCS2P54868 508 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
VPS26B-203ENST00000525918 DEFB118Q96PH6 123 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 PAK6Q9NQU5 681 aaPredicted RBP13.14□□□□□ -0.31
VPS26B-203ENST00000525918 PI4KBQ9UBF8 816 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
VPS26B-203ENST00000525918 PLCG2P16885 1265 aa13.13□□□□□ -0.31
VPS26B-203ENST00000525918 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
VPS26B-203ENST00000525918 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
VPS26B-203ENST00000525918 ALPK3Q96L96 1907 aa13.13□□□□□ -0.31
VPS26B-203ENST00000525918 PLXNB2O15031 1838 aa13.13□□□□□ -0.31
VPS26B-203ENST00000525918 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
VPS26B-203ENST00000525918 EVI5O60447 810 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 IGSF3O75054 1194 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 BCAR3O75815 825 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 PPP4CP60510 307 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 RRP1BQ14684 758 aaKnown RBP13.12□□□□□ -0.31
VPS26B-203ENST00000525918 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
VPS26B-203ENST00000525918 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
VPS26B-203ENST00000525918 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 CRISPLD2Q9H0B8 497 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 PRO3102Q9H379 93 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 GPR108Q9NPR9 543 aa13.12□□□□□ -0.31
VPS26B-203ENST00000525918 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
VPS26B-203ENST00000525918 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
VPS26B-203ENST00000525918 HMGCRP04035 888 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 ASNSP08243 561 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 BACE1P56817 501 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
VPS26B-203ENST00000525918 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 MYH1P12882 1939 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
VPS26B-203ENST00000525918 A0A1W2PPC1 479 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-203ENST00000525918 OS9Q13438 667 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-203ENST00000525918 POLA2Q14181 598 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
VPS26B-203ENST00000525918 ANKLE1Q8NAG6 615 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms