RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 RNF208Q9H0X6 261 aa25.59■■□□□ 1.69
PABPC1-218ENST00000521865 C1orf115Q9H7X2 142 aa25.59■■□□□ 1.69
PABPC1-218ENST00000521865 GPR108Q9NPR9 543 aa25.59■■□□□ 1.69
PABPC1-218ENST00000521865 PNMA3Q9UL41 463 aa25.59■■□□□ 1.69
PABPC1-218ENST00000521865 GABRQQ9UN88 632 aa25.59■■□□□ 1.69
PABPC1-218ENST00000521865 FPGT-TNNI3KV9GXZ4 949 aa25.59■■□□□ 1.69
PABPC1-218ENST00000521865 HNRNPUQ00839 825 aaKnown RBP eCLIP25.58■■□□□ 1.69
PABPC1-218ENST00000521865 SPP2Q13103 211 aa25.58■■□□□ 1.69
PABPC1-218ENST00000521865 POLA2Q14181 598 aa25.58■■□□□ 1.69
PABPC1-218ENST00000521865 AATFQ9NY61 560 aaKnown RBP eCLIP25.58■■□□□ 1.69
PABPC1-218ENST00000521865 ATP8B2P98198 1209 aa25.57■■□□□ 1.68
PABPC1-218ENST00000521865 TREML2Q5T2D2 321 aa25.57■■□□□ 1.68
PABPC1-218ENST00000521865 ITPRIPQ8IWB1 547 aa25.57■■□□□ 1.68
PABPC1-218ENST00000521865 ANKRD13CQ8N6S4 541 aa25.57■■□□□ 1.68
PABPC1-218ENST00000521865 ZNF280CQ8ND82 737 aa25.57■■□□□ 1.68
PABPC1-218ENST00000521865 TAOK2Q9UL54 1235 aa25.57■■□□□ 1.68
PABPC1-218ENST00000521865 COL2A1P02458 1487 aaPredicted RBP25.56■■□□□ 1.68
PABPC1-218ENST00000521865 FLT3LGP49771 235 aa25.56■■□□□ 1.68
PABPC1-218ENST00000521865 SSH3Q8TE77 659 aa25.56■■□□□ 1.68
PABPC1-218ENST00000521865 SHISA4Q96DD7 197 aa25.56■■□□□ 1.68
PABPC1-218ENST00000521865 HERC5Q9UII4 1024 aaKnown RBP25.56■■□□□ 1.68
PABPC1-218ENST00000521865 ADCY3O60266 1144 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 GJB1P08034 283 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 PLCG2P16885 1265 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 CAP2P40123 477 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 HMGCS2P54868 508 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 PROCA1Q8NCQ7 364 aaPredicted RBP25.55■■□□□ 1.68
PABPC1-218ENST00000521865 DPF3Q92784 378 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 TRIM34Q9BYJ4 488 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 TBC1D2Q9BYX2 928 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 DHX36Q9H2U1 1008 aaKnown RBP25.55■■□□□ 1.68
PABPC1-218ENST00000521865 AS3MTQ9HBK9 375 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 PI4KBQ9UBF8 816 aa25.55■■□□□ 1.68
PABPC1-218ENST00000521865 DOCK1Q14185 1865 aa25.54■■□□□ 1.68
PABPC1-218ENST00000521865 USP17L5A8MUK1 530 aa25.54■■□□□ 1.68
PABPC1-218ENST00000521865 GJA8P48165 433 aa25.54■■□□□ 1.68
PABPC1-218ENST00000521865 PABPC4Q13310 644 aaKnown RBP eCLIP25.54■■□□□ 1.681e-323■■■■■ 55.4
PABPC1-218ENST00000521865 MAPKAPK5Q8IW41 473 aa25.54■■□□□ 1.68
PABPC1-218ENST00000521865 TGFBRAP1Q8WUH2 860 aa25.54■■□□□ 1.68
PABPC1-218ENST00000521865 COA7Q96BR5 231 aa25.54■■□□□ 1.68
PABPC1-218ENST00000521865 CYP2E1P05181 493 aaPredicted RBP25.53■■□□□ 1.68
PABPC1-218ENST00000521865 ELNP15502 786 aa25.53■■□□□ 1.68
PABPC1-218ENST00000521865 CRACR2BQ8N4Y2 399 aaPredicted RBP25.53■■□□□ 1.68
PABPC1-218ENST00000521865 H0YGN5 161 aa25.52■■□□□ 1.68
PABPC1-218ENST00000521865 ZAP70P43403 619 aa25.52■■□□□ 1.68
PABPC1-218ENST00000521865 RRP1BQ14684 758 aaKnown RBP25.52■■□□□ 1.68
PABPC1-218ENST00000521865 UNC93B1Q9H1C4 597 aa25.52■■□□□ 1.68
PABPC1-218ENST00000521865 COLQQ9Y215 455 aaPredicted RBP25.52■■□□□ 1.68
PABPC1-218ENST00000521865 INHAP05111 366 aa25.51■■□□□ 1.67
PABPC1-218ENST00000521865 FAM110CQ1W6H9 321 aa25.51■■□□□ 1.67
PABPC1-218ENST00000521865 U2AF1L4Q8WU68 220 aaKnown RBP25.51■■□□□ 1.67
PABPC1-218ENST00000521865 CCDC8Q9H0W5 538 aaPredicted RBP25.51■■□□□ 1.67
PABPC1-218ENST00000521865 FLT1P17948 1338 aa25.5■■□□□ 1.67
PABPC1-218ENST00000521865 GCLCP48506 637 aaPredicted RBP25.5■■□□□ 1.67
PABPC1-218ENST00000521865 PPP4CP60510 307 aa25.5■■□□□ 1.67
PABPC1-218ENST00000521865 ADGRA1Q86SQ6 560 aa25.5■■□□□ 1.67
PABPC1-218ENST00000521865 PXYLP1Q8TE99 480 aa25.5■■□□□ 1.67
PABPC1-218ENST00000521865 HTATIP2Q9BUP3 242 aa25.5■■□□□ 1.67
PABPC1-218ENST00000521865 DBNLQ9UJU6 430 aaKnown RBP25.5■■□□□ 1.67
PABPC1-218ENST00000521865 IRF5Q13568 498 aa25.49■■□□□ 1.67
PABPC1-218ENST00000521865 ZNF512BQ96KM6 892 aaPredicted RBP25.49■■□□□ 1.67
PABPC1-218ENST00000521865 PIH1D3Q9NQM4 214 aaKnown RBP25.49■■□□□ 1.67
PABPC1-218ENST00000521865 TLR7Q9NYK1 1049 aaKnown RBP25.49■■□□□ 1.67
PABPC1-218ENST00000521865 TMOD4Q9NZQ9 345 aa25.49■■□□□ 1.67
PABPC1-218ENST00000521865 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
PABPC1-218ENST00000521865 ASNSP08243 561 aa25.48■■□□□ 1.67
PABPC1-218ENST00000521865 RLBP1P12271 317 aa25.48■■□□□ 1.67
PABPC1-218ENST00000521865 CYP7A1P22680 504 aa25.48■■□□□ 1.67
PABPC1-218ENST00000521865 MTMR2Q13614 643 aa25.48■■□□□ 1.67
PABPC1-218ENST00000521865 ASCC2Q9H1I8 757 aaPredicted RBP25.48■■□□□ 1.67
PABPC1-218ENST00000521865 SAP30BPQ9UHR5 308 aaKnown RBP25.48■■□□□ 1.67
PABPC1-218ENST00000521865 PALD1Q9ULE6 856 aa25.48■■□□□ 1.67
PABPC1-218ENST00000521865 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
PABPC1-218ENST00000521865 IDH1O75874 414 aaKnown RBP25.47■■□□□ 1.67
PABPC1-218ENST00000521865 FARP2O94887 1054 aaPredicted RBP25.47■■□□□ 1.67
PABPC1-218ENST00000521865 SGPL1O95470 568 aa25.47■■□□□ 1.67
PABPC1-218ENST00000521865 HLA-DOAP06340 250 aa25.47■■□□□ 1.67
PABPC1-218ENST00000521865 IRX3P78415 501 aaPredicted RBP25.47■■□□□ 1.67
PABPC1-218ENST00000521865 SH3D19Q5HYK7 790 aa25.47■■□□□ 1.67
PABPC1-218ENST00000521865 FOXP4Q8IVH2 680 aaPredicted RBP25.47■■□□□ 1.67
PABPC1-218ENST00000521865 GDF11O95390 407 aa25.46■■□□□ 1.67
PABPC1-218ENST00000521865 TFRCP02786 760 aaKnown RBP25.46■■□□□ 1.67
PABPC1-218ENST00000521865 DYNLL1P63167 89 aaKnown RBP25.46■■□□□ 1.67
PABPC1-218ENST00000521865 EAF2Q96CJ1 260 aaPredicted RBP25.46■■□□□ 1.67
PABPC1-218ENST00000521865 DEFB118Q96PH6 123 aa25.46■■□□□ 1.67
PABPC1-218ENST00000521865 WDR18Q9BV38 432 aa25.46■■□□□ 1.67
PABPC1-218ENST00000521865 PHIPQ8WWQ0 1821 aa25.45■■□□□ 1.66
PABPC1-218ENST00000521865 IGSF3O75054 1194 aa25.45■■□□□ 1.66
PABPC1-218ENST00000521865 BACE1P56817 501 aa25.45■■□□□ 1.66
PABPC1-218ENST00000521865 CHRDL2Q6WN34 429 aa25.45■■□□□ 1.66
PABPC1-218ENST00000521865 MIER1Q8N108 512 aa25.45■■□□□ 1.66
PABPC1-218ENST00000521865 MIGA1Q8NAN2 632 aa25.45■■□□□ 1.66
PABPC1-218ENST00000521865 FXR1P51114 621 aaKnown RBP eCLIP25.44■■□□□ 1.66
PABPC1-218ENST00000521865 DNAJC18Q9H819 358 aa25.44■■□□□ 1.66
PABPC1-218ENST00000521865 USP5P45974 858 aa25.43■■□□□ 1.66
PABPC1-218ENST00000521865 JAG1P78504 1218 aa25.43■■□□□ 1.66
PABPC1-218ENST00000521865 CEP85Q6P2H3 762 aa25.43■■□□□ 1.66
PABPC1-218ENST00000521865 UBE2Q1Q7Z7E8 422 aa25.43■■□□□ 1.66
PABPC1-218ENST00000521865 ZBTB21Q9ULJ3 1066 aa25.43■■□□□ 1.66
PABPC1-218ENST00000521865 NR2E3Q9Y5X4 410 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms