RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 GLYCTKQ8IVS8 523 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 HPS1Q92902 700 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 ZNF428Q96B54 188 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 NLRP3Q96P20 1036 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 PLEKHF1Q96S99 279 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 BACH2Q9BYV9 841 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 CHMP4BQ9H444 224 aaKnown RBP4.98□□□□□ -1.61
PVT1-211ENST00000521600 NARFQ9UHQ1 456 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 NOP58Q9Y2X3 529 aaKnown RBP4.98□□□□□ -1.61
PVT1-211ENST00000521600 RRP7AQ9Y3A4 280 aaKnown RBP4.98□□□□□ -1.61
PVT1-211ENST00000521600 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 DNMT3AQ9Y6K1 912 aaPredicted RBP4.98□□□□□ -1.61
PVT1-211ENST00000521600 KIF16BQ96L93 1317 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 MUC3AQ02505 3323 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 ERVV-2B6SEH9 535 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 PPM1GO15355 546 aaPredicted RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 IPO8O15397 1037 aaKnown RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 ICMTO60725 284 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 CELF2O95319 508 aaKnown RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 RIPK4P57078 832 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 PSMA6P60900 246 aaKnown RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 ZKSCAN2Q63HK3 967 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 TBC1D9BQ66K14 1250 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 PRR5LQ6MZQ0 368 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 BICDL1Q6ZP65 573 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 CTU1Q7Z7A3 348 aaKnown RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 SLC51AQ86UW1 340 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 DNAJC10Q8IXB1 793 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 FTSJ3Q8IY81 847 aaKnown RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 FRAT1Q92837 279 aaPredicted RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 COL26A1Q96A83 441 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 HHIPL1Q96JK4 782 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 POLKQ9UBT6 870 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 EGFL7Q9UHF1 273 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 IQSEC3Q9UPP2 1182 aaPredicted RBP4.97□□□□□ -1.61
PVT1-211ENST00000521600 ZBTB1Q9Y2K1 713 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 CHMP3Q9Y3E7 222 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 PRUNE2Q8WUY3 3088 aa4.97□□□□□ -1.61
PVT1-211ENST00000521600 KIF24Q5T7B8 1368 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 FAM155AB1AL88 458 aaPredicted RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 CDK2AP1O14519 115 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 SRGNP10124 158 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 FKBP4Q02790 459 aaKnown RBP eCLIP4.96□□□□□ -1.62
PVT1-211ENST00000521600 NFE2L2Q16236 605 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 ALDH1L2Q3SY69 923 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 SH3PXD2AQ5TCZ1 1133 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 DLK2Q6UY11 383 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 DZIP1LQ8IYY4 767 aaKnown RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 GPC2Q8N158 579 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 MEIOBQ8N635 442 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 SLC17A8Q8NDX2 589 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 ZSCAN10Q96SZ4 725 aaPredicted RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 C2orf49Q9BVC5 232 aaPredicted RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 BRIP1Q9BX63 1249 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 GLIS2Q9BZE0 524 aaPredicted RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 SAP130Q9H0E3 1048 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 RWDD1Q9H446 243 aaPredicted RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.96□□□□□ -1.622e-7■■■■■ 214.2
PVT1-211ENST00000521600 RNF186Q9NXI6 227 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 SIPA1L3O60292 1781 aaPredicted RBP4.96□□□□□ -1.62
PVT1-211ENST00000521600 KDM3BQ7LBC6 1761 aa4.96□□□□□ -1.62
PVT1-211ENST00000521600 CAPN5O15484 640 aaPredicted RBP4.95□□□□□ -1.62
PVT1-211ENST00000521600 TRPA1O75762 1119 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 CYP19A1P11511 503 aaPredicted RBP4.95□□□□□ -1.62
PVT1-211ENST00000521600 PRKAR2BP31323 418 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 IL13P35225 146 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 PDE6BP35913 854 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 IARSP41252 1262 aaKnown RBP4.95□□□□□ -1.62
PVT1-211ENST00000521600 GNAI1P63096 354 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 NOGQ13253 232 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 MVPQ14764 893 aaKnown RBP4.95□□□□□ -1.62
PVT1-211ENST00000521600 CCDC93Q567U6 631 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 STYK1Q6J9G0 422 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 C16orf46Q6P387 395 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 LINC00528Q8N1L1 170 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 SYNE4Q8N205 404 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 HELQQ8TDG4 1101 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 ZNF408Q9H9D4 720 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 SMC4Q9NTJ3 1288 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 IFT57Q9NWB7 429 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 SAGE1Q9NXZ1 904 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 DDX19BQ9UMR2 479 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 ZNF232Q9UNY5 417 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 HCN4Q9Y3Q4 1203 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 GJA3Q9Y6H8 435 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 LAMA2P24043 3122 aaKnown RBP4.95□□□□□ -1.62
PVT1-211ENST00000521600 PITPNM2Q9BZ72 1349 aa4.95□□□□□ -1.62
PVT1-211ENST00000521600 MRC1P22897 1456 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 SERTM1A2A2V5 107 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 EML1O00423 815 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 MPSTP25325 297 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 GTF2E1P29083 439 aaPredicted RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 NOS2P35228 1153 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 MARSP56192 900 aaKnown RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 CABP4P57796 275 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 KIF23Q02241 960 aaPredicted RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 EXOSC9Q06265 439 aaKnown RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 TEAD4Q15561 434 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 COX20Q5RI15 118 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 TMEM214Q6NUQ4 689 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms