RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
SDHA-217ENST00000514233 TNPO2O14787 897 aaKnown RBP11.11□□□□□ -0.63
SDHA-217ENST00000514233 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
SDHA-217ENST00000514233 SRGAP3O43295 1099 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 BCAR3O75815 825 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 INHAP05111 366 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 GSTO1P78417 241 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 PICALMQ13492 652 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 COA7Q96BR5 231 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 NSUN4Q96CB9 384 aaKnown RBP11.11□□□□□ -0.63
SDHA-217ENST00000514233 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
SDHA-217ENST00000514233 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 DOCK3Q8IZD9 2030 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 LDHCP07864 332 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 SLURP2P0DP57 97 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 TRIM27P14373 513 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 ELNP15502 786 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
SDHA-217ENST00000514233 GCLCP48506 637 aaPredicted RBP11.1□□□□□ -0.63
SDHA-217ENST00000514233 TFCP2Q12800 502 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 TREML2Q5T2D2 321 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 HMG20BQ9P0W2 317 aa11.1□□□□□ -0.63
SDHA-217ENST00000514233 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
SDHA-217ENST00000514233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.1□□□□□ -0.63
SDHA-217ENST00000514233 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 IGSF3O75054 1194 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 CAP2P40123 477 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDHA-217ENST00000514233 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDHA-217ENST00000514233 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 DEFB118Q96PH6 123 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDHA-217ENST00000514233 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
SDHA-217ENST00000514233 SIPA1L1O43166 1804 aa11.09□□□□□ -0.63
SDHA-217ENST00000514233 EVI5O60447 810 aa11.08□□□□□ -0.64
SDHA-217ENST00000514233 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
SDHA-217ENST00000514233 SPP2Q13103 211 aa11.08□□□□□ -0.64
SDHA-217ENST00000514233 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
SDHA-217ENST00000514233 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
SDHA-217ENST00000514233 WDR18Q9BV38 432 aa11.08□□□□□ -0.64
SDHA-217ENST00000514233 UNC80Q8N2C7 3258 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 PNMA6EA0A0J9YXQ4 647 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 HMGCRP04035 888 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 GNAI2P04899 355 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 UQCRFS1P1P0C7P4 283 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 HMGCS2P54868 508 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 PI16Q6UXB8 463 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 METTL16Q86W50 562 aaKnown RBP11.07□□□□□ -0.64
SDHA-217ENST00000514233 MIER1Q8N108 512 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 TMEM57Q8N5G2 664 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
SDHA-217ENST00000514233 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
SDHA-217ENST00000514233 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
SDHA-217ENST00000514233 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 GINM1Q9NU53 330 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 MORF4L1Q9UBU8 362 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
SDHA-217ENST00000514233 FAM196BA6NMK8 535 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
SDHA-217ENST00000514233 ASNSP08243 561 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 PLCG2P16885 1265 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
SDHA-217ENST00000514233 MCAMP43121 646 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 PPP4CP60510 307 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
SDHA-217ENST00000514233 NECAB2Q7Z6G3 386 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 RAI14Q9P0K7 980 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 RPTORQ8N122 1335 aa11.06□□□□□ -0.64
SDHA-217ENST00000514233 BAG3O95817 575 aa11.05□□□□□ -0.64
SDHA-217ENST00000514233 BACE1P56817 501 aa11.05□□□□□ -0.64
SDHA-217ENST00000514233 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.646e-8■■□□□ 13.1
SDHA-217ENST00000514233 MAP3K21Q5TCX8 1036 aa11.05□□□□□ -0.64
SDHA-217ENST00000514233 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
SDHA-217ENST00000514233 PAWRQ96IZ0 340 aaKnown RBP11.05□□□□□ -0.64
SDHA-217ENST00000514233 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
SDHA-217ENST00000514233 MYH1P12882 1939 aa11.04□□□□□ -0.64
SDHA-217ENST00000514233 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
SDHA-217ENST00000514233 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
SDHA-217ENST00000514233 BMP8BP34820 402 aa11.04□□□□□ -0.64
SDHA-217ENST00000514233 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
SDHA-217ENST00000514233 DIEXFQ68CQ4 756 aaKnown RBP11.04□□□□□ -0.64
SDHA-217ENST00000514233 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
SDHA-217ENST00000514233 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
SDHA-217ENST00000514233 FOXP4Q8IVH2 680 aaPredicted RBP11.04□□□□□ -0.64
SDHA-217ENST00000514233 ZNF512BQ96KM6 892 aaPredicted RBP11.04□□□□□ -0.64
SDHA-217ENST00000514233 GDF15Q99988 308 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms