RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
PFDN1-204ENST00000512707 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
PFDN1-204ENST00000512707 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 PALD1Q9ULE6 856 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 CYP46A1Q9Y6A2 500 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 LAMA4Q16363 1823 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 ROBO3Q96MS0 1386 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 PCNTO95613 3336 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 EPHX2P34913 555 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 HTRA3P83110 453 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 FGD1P98174 961 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 ESR2Q92731 530 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 DCPSQ96C86 337 aaKnown RBP12.84□□□□□ -0.35
PFDN1-204ENST00000512707 IL17RAQ96F46 866 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
PFDN1-204ENST00000512707 PI4KBQ9UBF8 816 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 SWAP70Q9UH65 585 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 PITPNM2Q9BZ72 1349 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 LAMB1P07942 1786 aa12.84□□□□□ -0.35
PFDN1-204ENST00000512707 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
PFDN1-204ENST00000512707 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 ANGEL2Q5VTE6 544 aaKnown RBP12.83□□□□□ -0.36
PFDN1-204ENST00000512707 IFNLR1Q8IU57 520 aaPredicted RBP12.83□□□□□ -0.36
PFDN1-204ENST00000512707 TBC1D10CQ8IV04 446 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 TRPM4Q8TD43 1214 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
PFDN1-204ENST00000512707 CSRNP1Q96S65 589 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 EHD4Q9H223 541 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 GGA3Q9NZ52 723 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 SERPINB13Q9UIV8 391 aa12.83□□□□□ -0.36
PFDN1-204ENST00000512707 ATRNL1Q5VV63 1379 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 DDX60LQ5H9U9 1706 aaKnown RBP12.82□□□□□ -0.36
PFDN1-204ENST00000512707 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 ORC4O43929 436 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 EGFRP00533 1210 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 CYP2D6P10635 497 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-204ENST00000512707 MCM5P33992 734 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 NEK4P51957 841 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 RRP12Q5JTH9 1297 aaKnown RBP12.82□□□□□ -0.36
PFDN1-204ENST00000512707 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-204ENST00000512707 SULF1Q8IWU6 871 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 ZNF444Q8N0Y2 327 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-204ENST00000512707 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 RRAGCQ9HB90 399 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
PFDN1-204ENST00000512707 SCN4AP35499 1836 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
PFDN1-204ENST00000512707 ERICH2A1L162 156 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 MCM2P49736 904 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 PLCD1P51178 756 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 BECN1Q14457 450 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 RASA3Q14644 834 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 COL13A1Q5TAT6 717 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 C16orf86Q6ZW13 317 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 DHX32Q7L7V1 743 aaKnown RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 IQCA1Q86XH1 822 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 DEFB129Q9H1M3 183 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 TAF1DQ9H5J8 278 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 MYH1P12882 1939 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
PFDN1-204ENST00000512707 WDR19Q8NEZ3 1342 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
PFDN1-204ENST00000512707 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
PFDN1-204ENST00000512707 KDM4AO75164 1064 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 CDK8P49336 464 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 KIF2CQ99661 725 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 TMEM39BQ9GZU3 492 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
PFDN1-204ENST00000512707 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms