RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 EPS8L3Q8TE67 593 aaKnown RBP6.72□□□□□ -1.33
UBE2D3-230ENST00000510599 ASB11Q8WXH4 323 aa6.72□□□□□ -1.33
UBE2D3-230ENST00000510599 GTF2IRD1Q9UHL9 959 aa6.72□□□□□ -1.33
UBE2D3-230ENST00000510599 CUL7Q14999 1698 aa6.71□□□□□ -1.33
UBE2D3-230ENST00000510599 FBLN7Q53RD9 439 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 ZC3H12AQ5D1E8 599 aaKnown RBP6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 MAP1SQ66K74 1059 aaPredicted RBP6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 SPOCD1Q6ZMY3 1216 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 BHLHE22Q8NFJ8 381 aaPredicted RBP6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 ACSBG1Q96GR2 724 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 FAM84AQ96KN4 292 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 TOPBP1Q92547 1522 aa6.71□□□□□ -1.34
UBE2D3-230ENST00000510599 LRRC10BA6NIK2 292 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 NME2P22392 152 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 ARNTP27540 789 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 IKZF1Q13422 519 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 KCNMB1Q16558 191 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 RBCK1Q9BYM8 510 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 CTTNBP2Q8WZ74 1663 aa6.7□□□□□ -1.34
UBE2D3-230ENST00000510599 NESP48681 1621 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 CLIP1P30622 1438 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 ZP2Q05996 745 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 GPBAR1Q8TDU6 330 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 C1orf115Q9H7X2 142 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 ABCA10Q8WWZ4 1543 aa6.69□□□□□ -1.34
UBE2D3-230ENST00000510599 VPS8Q8N3P4 1428 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 PDS5BQ9NTI5 1447 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 CUX2O14529 1486 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 SPACA3Q8IXA5 215 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 STK35Q8TDR2 534 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 HEXIM2Q96MH2 286 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 BCO2Q9BYV7 579 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 CBX8Q9HC52 389 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 PRDM10Q9NQV6 1147 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 PRDM7Q9NQW5 492 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 PICK1Q9NRD5 415 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 AKAP2Q9Y2D5 859 aa6.68□□□□□ -1.34
UBE2D3-230ENST00000510599 POLA1P09884 1462 aaPredicted RBP6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 GNAT3A8MTJ3 354 aa6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 CLCN7P51798 805 aa6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 MESP2Q0VG99 397 aa6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 PI16Q6UXB8 463 aa6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 TXNDC2Q86VQ3 553 aa6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 ABCA5Q8WWZ7 1642 aa6.67□□□□□ -1.34
UBE2D3-230ENST00000510599 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 ZEB1P37275 1124 aaPredicted RBP6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 ZNF252P-AS1Q0IIN9 211 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 MLANAQ16655 118 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 PPM1JQ5JR12 505 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 FAM214BQ7L5A3 538 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 PPP1R16BQ96T49 567 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 SAMM50Q9Y512 469 aa6.66□□□□□ -1.34
UBE2D3-230ENST00000510599 AFMP43652 599 aa6.65□□□□□ -1.34
UBE2D3-230ENST00000510599 KCT2Q8NC54 265 aa6.65□□□□□ -1.34
UBE2D3-230ENST00000510599 CCER1Q8TC90 406 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-230ENST00000510599 TOX2Q96NM4 488 aa6.65□□□□□ -1.34
UBE2D3-230ENST00000510599 CACNA2D2Q9NY47 1150 aa6.65□□□□□ -1.34
UBE2D3-230ENST00000510599 CTNND2Q9UQB3 1225 aa6.65□□□□□ -1.34
UBE2D3-230ENST00000510599 PBRM1Q86U86 1689 aa6.65□□□□□ -1.35
UBE2D3-230ENST00000510599 ZNF503-AS2A6NEH8 195 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 FANCGO15287 622 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 TRIM37O94972 964 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 NKPD1Q17RQ9 610 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 NXPE4Q6UWF7 544 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 CDC37L1Q7L3B6 337 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 FOXQ1Q9C009 403 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 PRDM5Q9NQX1 630 aaPredicted RBP6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 MAPK8IP1Q9UQF2 711 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 CSADQ9Y600 493 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 PITPNM2Q9BZ72 1349 aa6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 TARBP1Q13395 1621 aaKnown RBP6.64□□□□□ -1.35
UBE2D3-230ENST00000510599 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 TSPAN15O95858 294 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 NTF4P34130 210 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 TMC7Q7Z402 723 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 ARAP1Q96P48 1450 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 NECAB3Q96P71 396 aaPredicted RBP6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 CEP44Q9C0F1 390 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 LMCD1Q9NZU5 365 aa6.63□□□□□ -1.35
UBE2D3-230ENST00000510599 RAD54L2Q9Y4B4 1467 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 CARMIL1Q5VZK9 1371 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 PNMA6FA0A0J9YX94 578 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 GLI1P08151 1106 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 GSTT1P30711 240 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 ZBTB37Q5TC79 503 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 PPM1HQ9ULR3 514 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 GTF3C3Q9Y5Q9 886 aa6.62□□□□□ -1.35
UBE2D3-230ENST00000510599 EFCAB5A4FU69 1503 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms