RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 MYH1P12882 1939 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 APBB1O00213 710 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 TBC1D12O60347 775 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 PLCG2P16885 1265 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 SOX10P56693 466 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 PPP4CP60510 307 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 ANKRD23Q86SG2 305 aa12.56□□□□□ -0.4
PFDN1-203ENST00000510217 NOL10Q9BSC4 688 aaKnown RBP12.56□□□□□ -0.4
PFDN1-203ENST00000510217 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
PFDN1-203ENST00000510217 A0A0G2JLL6 359 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 TLR2O60603 784 aa12.55□□□□□ -0.4
PFDN1-203ENST00000510217 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 IDH1O75874 414 aaKnown RBP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 BAG3O95817 575 aa12.55□□□□□ -0.4
PFDN1-203ENST00000510217 PRRT2Q7Z6L0 340 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 CLASRPQ8N2M8 674 aaKnown RBP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.55□□□□□ -0.4
PFDN1-203ENST00000510217 PICK1Q9NRD5 415 aa12.55□□□□□ -0.4
PFDN1-203ENST00000510217 AFG3L2Q9Y4W6 797 aa12.55□□□□□ -0.4
PFDN1-203ENST00000510217 PDHXO00330 501 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 CXCL11O14625 94 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 CYP7A1P22680 504 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
PFDN1-203ENST00000510217 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
PFDN1-203ENST00000510217 GPAT2Q6NUI2 795 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
PFDN1-203ENST00000510217 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 MAGEB6Q8N7X4 407 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 TGFBRAP1Q8WUH2 860 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 ZHX2Q9Y6X8 837 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 MYH7P12883 1935 aa12.54□□□□□ -0.4
PFDN1-203ENST00000510217 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-203ENST00000510217 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-203ENST00000510217 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
PFDN1-203ENST00000510217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
PFDN1-203ENST00000510217 ARHGAP39Q9C0H5 1083 aa12.53□□□□□ -0.4
PFDN1-203ENST00000510217 HERC5Q9UII4 1024 aaKnown RBP12.53□□□□□ -0.4
PFDN1-203ENST00000510217 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
PFDN1-203ENST00000510217 MGAMO43451 1857 aa12.53□□□□□ -0.4
PFDN1-203ENST00000510217 TRIM75PA6NK02 468 aa12.52□□□□□ -0.41
PFDN1-203ENST00000510217 IFIT2P09913 472 aaKnown RBP12.52□□□□□ -0.41
PFDN1-203ENST00000510217 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-203ENST00000510217 C17orf99Q6UX52 265 aa12.52□□□□□ -0.41
PFDN1-203ENST00000510217 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.41
PFDN1-203ENST00000510217 PARK7Q99497 189 aaKnown RBP12.52□□□□□ -0.41
PFDN1-203ENST00000510217 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
PFDN1-203ENST00000510217 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
PFDN1-203ENST00000510217 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 CAP2P40123 477 aa12.51□□□□□ -0.41
PFDN1-203ENST00000510217 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
PFDN1-203ENST00000510217 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 TTF1Q15361 905 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 CERS3Q8IU89 383 aa12.51□□□□□ -0.41
PFDN1-203ENST00000510217 EDC3Q96F86 508 aaKnown RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
PFDN1-203ENST00000510217 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
PFDN1-203ENST00000510217 PALD1Q9ULE6 856 aa12.51□□□□□ -0.41
PFDN1-203ENST00000510217 CENPFP49454 3210 aa12.51□□□□□ -0.41
PFDN1-203ENST00000510217 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 GOLIM4O00461 696 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 CYP2C8P10632 490 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 PDE6AP16499 860 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 CTGFP29279 349 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 JAG1P78504 1218 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 SHROOM1Q2M3G4 852 aaPredicted RBP12.5□□□□□ -0.41
PFDN1-203ENST00000510217 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 FASTKD5Q7L8L6 764 aaKnown RBP12.5□□□□□ -0.41
PFDN1-203ENST00000510217 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 SLC45A1Q9Y2W3 748 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
PFDN1-203ENST00000510217 PTCH2Q9Y6C5 1203 aa12.5□□□□□ -0.41
PFDN1-203ENST00000510217 ZNF532Q9HCE3 1301 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
PFDN1-203ENST00000510217 HLA-DOAP06340 250 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 BCRP11274 1271 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
PFDN1-203ENST00000510217 TREML2Q5T2D2 321 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 BRCA2P51587 3418 aa12.49□□□□□ -0.41
PFDN1-203ENST00000510217 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-203ENST00000510217 GDF11O95390 407 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 ATP5JP18859 108 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 USP5P45974 858 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 SPP2Q13103 211 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms