RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 GORABQ5T7V8 394 aa28.42■■■□□ 2.14
CALCOCO2-209ENST00000507076 NSUN4Q96CB9 384 aaKnown RBP28.42■■■□□ 2.14
CALCOCO2-209ENST00000507076 RAI14Q9P0K7 980 aa28.42■■■□□ 2.14
CALCOCO2-209ENST00000507076 COL2A1P02458 1487 aaPredicted RBP28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 GSTO1P78417 241 aa28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 IRF5Q13568 498 aa28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 PXYLP1Q8TE99 480 aa28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 DEFB118Q96PH6 123 aa28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 PNMA3Q9UL41 463 aa28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 PLXNB2O15031 1838 aa28.41■■■□□ 2.14
CALCOCO2-209ENST00000507076 NPM3O75607 178 aaKnown RBP28.4■■■□□ 2.14
CALCOCO2-209ENST00000507076 LDHCP07864 332 aa28.4■■■□□ 2.14
CALCOCO2-209ENST00000507076 SPP2Q13103 211 aa28.4■■■□□ 2.14
CALCOCO2-209ENST00000507076 ARHGAP45Q92619 1136 aa28.4■■■□□ 2.14
CALCOCO2-209ENST00000507076 COA7Q96BR5 231 aa28.4■■■□□ 2.14
CALCOCO2-209ENST00000507076 OSBPL5Q9H0X9 879 aaPredicted RBP28.4■■■□□ 2.14
CALCOCO2-209ENST00000507076 FAM110CQ1W6H9 321 aa28.39■■■□□ 2.14
CALCOCO2-209ENST00000507076 PROCA1Q8NCQ7 364 aaPredicted RBP28.39■■■□□ 2.14
CALCOCO2-209ENST00000507076 TNNQ9UQP3 1299 aa28.39■■■□□ 2.14
CALCOCO2-209ENST00000507076 NR2E3Q9Y5X4 410 aa28.39■■■□□ 2.14
CALCOCO2-209ENST00000507076 TFRCP02786 760 aaKnown RBP28.38■■■□□ 2.13
CALCOCO2-209ENST00000507076 ARID4AP29374 1257 aaPredicted RBP28.38■■■□□ 2.13
CALCOCO2-209ENST00000507076 HMGCS2P54868 508 aa28.38■■■□□ 2.13
CALCOCO2-209ENST00000507076 RRP1BQ14684 758 aaKnown RBP28.38■■■□□ 2.13
CALCOCO2-209ENST00000507076 SZT2Q5T011 3432 aa28.37■■■□□ 2.13
CALCOCO2-209ENST00000507076 ZBTB7BO15156 539 aaPredicted RBP28.37■■■□□ 2.13
CALCOCO2-209ENST00000507076 MCAMP43121 646 aa28.37■■■□□ 2.13
CALCOCO2-209ENST00000507076 TEX11Q8IYF3 940 aa28.37■■■□□ 2.13
CALCOCO2-209ENST00000507076 ZNF280CQ8ND82 737 aa28.37■■■□□ 2.13
CALCOCO2-209ENST00000507076 PNMA6EA0A0J9YXQ4 647 aa28.36■■■□□ 2.13
CALCOCO2-209ENST00000507076 CAP2P40123 477 aa28.36■■■□□ 2.13
CALCOCO2-209ENST00000507076 SH3RF3Q8TEJ3 882 aaPredicted RBP28.36■■■□□ 2.13
CALCOCO2-209ENST00000507076 PAK6Q9NQU5 681 aaPredicted RBP28.36■■■□□ 2.13
CALCOCO2-209ENST00000507076 LRP2BPQ9P2M1 347 aa28.36■■■□□ 2.13
CALCOCO2-209ENST00000507076 RANBP2P49792 3224 aaKnown RBP28.36■■■□□ 2.13
CALCOCO2-209ENST00000507076 MAP4K4O95819 1239 aaPredicted RBP28.35■■■□□ 2.13
CALCOCO2-209ENST00000507076 GNAI2P04899 355 aa28.35■■■□□ 2.13
CALCOCO2-209ENST00000507076 TRIM27P14373 513 aa28.35■■■□□ 2.13
CALCOCO2-209ENST00000507076 PRO3102Q9H379 93 aa28.35■■■□□ 2.13
CALCOCO2-209ENST00000507076 EVI5O60447 810 aa28.34■■■□□ 2.13
CALCOCO2-209ENST00000507076 G3BP1Q13283 466 aaKnown RBP eCLIP28.34■■■□□ 2.13
CALCOCO2-209ENST00000507076 DDX60LQ5H9U9 1706 aaKnown RBP28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 USP17L5A8MUK1 530 aa28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 GCLCP48506 637 aaPredicted RBP28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 FRAT1Q92837 279 aaPredicted RBP28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 ASCC2Q9H1I8 757 aaPredicted RBP28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 SNRKQ9NRH2 765 aa28.33■■■□□ 2.13
CALCOCO2-209ENST00000507076 UQCRFS1P1P0C7P4 283 aa28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 PABPC4Q13310 644 aaKnown RBP eCLIP28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 CLUAP1Q96AJ1 413 aa28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 NOL10Q9BSC4 688 aaKnown RBP28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 TBC1D2Q9BYX2 928 aa28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 CRISPLD2Q9H0B8 497 aa28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 AATFQ9NY61 560 aaKnown RBP eCLIP28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 HERC5Q9UII4 1024 aaKnown RBP28.32■■■□□ 2.12
CALCOCO2-209ENST00000507076 MYH1P12882 1939 aa28.31■■■□□ 2.12
CALCOCO2-209ENST00000507076 DIS3LQ8TF46 1054 aaKnown RBP28.31■■■□□ 2.12
CALCOCO2-209ENST00000507076 PAWRQ96IZ0 340 aaKnown RBP28.31■■■□□ 2.12
CALCOCO2-209ENST00000507076 AS3MTQ9HBK9 375 aa28.31■■■□□ 2.12
CALCOCO2-209ENST00000507076 IPO8O15397 1037 aaKnown RBP28.3■■■□□ 2.12
CALCOCO2-209ENST00000507076 SH3D19Q5HYK7 790 aa28.3■■■□□ 2.12
CALCOCO2-209ENST00000507076 ATF7IPQ6VMQ6 1270 aa28.3■■■□□ 2.12
CALCOCO2-209ENST00000507076 BCAR3O75815 825 aa28.29■■■□□ 2.12
CALCOCO2-209ENST00000507076 HMGCRP04035 888 aa28.29■■■□□ 2.12
CALCOCO2-209ENST00000507076 MTMR2Q13614 643 aa28.29■■■□□ 2.12
CALCOCO2-209ENST00000507076 NAA16Q6N069 864 aaPredicted RBP28.29■■■□□ 2.12
CALCOCO2-209ENST00000507076 PI4KBQ9UBF8 816 aa28.29■■■□□ 2.12
CALCOCO2-209ENST00000507076 TRIM32Q13049 653 aa28.28■■■□□ 2.12
CALCOCO2-209ENST00000507076 TTC39AQ5SRH9 613 aa28.28■■■□□ 2.12
CALCOCO2-209ENST00000507076 MAPKAPK5Q8IW41 473 aa28.28■■■□□ 2.12
CALCOCO2-209ENST00000507076 TGFBRAP1Q8WUH2 860 aa28.28■■■□□ 2.12
CALCOCO2-209ENST00000507076 CAPN2P17655 700 aa28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 IRX3P78415 501 aaPredicted RBP28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 JAG1P78504 1218 aa28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 SHROOM1Q2M3G4 852 aaPredicted RBP28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 ADGRA1Q86SQ6 560 aa28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 DBNDD2Q9BQY9 259 aa28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 DNAJC18Q9H819 358 aa28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 GJD2Q9UKL4 321 aa28.27■■■□□ 2.12
CALCOCO2-209ENST00000507076 FLT1P17948 1338 aa28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 PEX10O60683 326 aa28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 BAG3O95817 575 aa28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 TNNI3KQ59H18 835 aa28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 NECAB2Q7Z6G3 386 aa28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 DHX36Q9H2U1 1008 aaKnown RBP28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 FPGT-TNNI3KV9GXZ4 949 aa28.26■■■□□ 2.11
CALCOCO2-209ENST00000507076 WDR18Q9BV38 432 aa28.25■■■□□ 2.11
CALCOCO2-209ENST00000507076 TMOD4Q9NZQ9 345 aa28.25■■■□□ 2.11
CALCOCO2-209ENST00000507076 MORF4L1Q9UBU8 362 aa28.25■■■□□ 2.11
CALCOCO2-209ENST00000507076 STAP2Q9UGK3 403 aa28.25■■■□□ 2.11
CALCOCO2-209ENST00000507076 GDF11O95390 407 aa28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 ASNSP08243 561 aa28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 PLCG2P16885 1265 aa28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 BACE1P56817 501 aa28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 OS9Q13438 667 aaPredicted RBP28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 CRACR2BQ8N4Y2 399 aaPredicted RBP28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 TMEM57Q8N5G2 664 aa28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 TRIM34Q9BYJ4 488 aa28.24■■■□□ 2.11
CALCOCO2-209ENST00000507076 HMX1Q9NP08 348 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms