RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 DNAJC14Q6Y2X3 702 aaPredicted RBP7.62□□□□□ -1.19
SMC4-224ENST00000494612 ANKLE2Q86XL3 938 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 SIAH1Q8IUQ4 282 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 LRRC56Q8IYG6 542 aaPredicted RBP7.62□□□□□ -1.19
SMC4-224ENST00000494612 RNF214Q8ND24 703 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 HEXIM2Q96MH2 286 aaKnown RBP7.62□□□□□ -1.19
SMC4-224ENST00000494612 TNKS2Q9H2K2 1166 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 NLRP2Q9NX02 1062 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 TMEM265A0A087WTH1 108 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 TSPAN15O95858 294 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 CEACAM5P06731 702 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 NME2P22392 152 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 AOC3Q16853 763 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 ANGEL2Q5VTE6 544 aaKnown RBP7.61□□□□□ -1.19
SMC4-224ENST00000494612 C3orf58Q8NDZ4 430 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 HRASLS5Q96KN8 279 aa7.61□□□□□ -1.19
SMC4-224ENST00000494612 NXPE4Q6UWF7 544 aa7.6□□□□□ -1.19
SMC4-224ENST00000494612 CILP2Q8IUL8 1156 aa7.6□□□□□ -1.19
SMC4-224ENST00000494612 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMC4-224ENST00000494612 ZSCAN29Q8IWY8 852 aaPredicted RBP7.6□□□□□ -1.19
SMC4-224ENST00000494612 FLAD1Q8NFF5 587 aa7.6□□□□□ -1.19
SMC4-224ENST00000494612 GPBAR1Q8TDU6 330 aa7.6□□□□□ -1.19
SMC4-224ENST00000494612 ZSCAN22P10073 491 aaPredicted RBP7.59□□□□□ -1.19
SMC4-224ENST00000494612 NTF4P34130 210 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMC4-224ENST00000494612 MAP1SQ66K74 1059 aaPredicted RBP7.59□□□□□ -1.19
SMC4-224ENST00000494612 SLC23A3Q6PIS1 610 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 LCNL1Q6ZST4 164 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 TOP6BLQ8N6T0 577 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 NECAB3Q96P71 396 aaPredicted RBP7.59□□□□□ -1.19
SMC4-224ENST00000494612 EMILIN2Q9BXX0 1053 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMC4-224ENST00000494612 AKAP2Q9Y2D5 859 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 SNX11Q9Y5W9 270 aa7.59□□□□□ -1.19
SMC4-224ENST00000494612 BMP6P22004 513 aa7.58□□□□□ -1.2
SMC4-224ENST00000494612 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
SMC4-224ENST00000494612 TAGLNQ01995 201 aaKnown RBP7.58□□□□□ -1.2
SMC4-224ENST00000494612 RING1Q06587 406 aa7.58□□□□□ -1.2
SMC4-224ENST00000494612 ENOX2Q16206 610 aaKnown RBP7.58□□□□□ -1.2
SMC4-224ENST00000494612 ASB16Q96NS5 453 aa7.58□□□□□ -1.2
SMC4-224ENST00000494612 SSU72Q9NP77 194 aaKnown RBP7.58□□□□□ -1.2
SMC4-224ENST00000494612 IGF2BP3O00425 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMC4-224ENST00000494612 NPM2Q86SE8 214 aaKnown RBP7.57□□□□□ -1.2
SMC4-224ENST00000494612 C1QL4Q86Z23 238 aa7.57□□□□□ -1.2
SMC4-224ENST00000494612 GRIN3AQ8TCU5 1115 aa7.57□□□□□ -1.2
SMC4-224ENST00000494612 LMCD1Q9NZU5 365 aa7.57□□□□□ -1.2
SMC4-224ENST00000494612 ZNF503-AS2A6NEH8 195 aa7.56□□□□□ -1.2
SMC4-224ENST00000494612 TREHO43280 583 aa7.56□□□□□ -1.2
SMC4-224ENST00000494612 BUD31P41223 144 aaPredicted RBP7.56□□□□□ -1.2
SMC4-224ENST00000494612 PLCB3Q01970 1234 aa7.56□□□□□ -1.2
SMC4-224ENST00000494612 SYDE1Q6ZW31 735 aaPredicted RBP7.56□□□□□ -1.2
SMC4-224ENST00000494612 NPAS4Q8IUM7 802 aa7.56□□□□□ -1.2
SMC4-224ENST00000494612 RAPGEFL1Q9UHV5 662 aa7.56□□□□□ -1.2
SMC4-224ENST00000494612 ENC1O14682 589 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 MAPK8P45983 427 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 UBE3DQ7Z6J8 389 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 SPACA3Q8IXA5 215 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 PRDM10Q9NQV6 1147 aa7.55□□□□□ -1.2
SMC4-224ENST00000494612 PNMA6FA0A0J9YX94 578 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 PAGE1O75459 146 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 ITIH2P19823 946 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 LIN37Q96GY3 246 aaPredicted RBP7.54□□□□□ -1.2
SMC4-224ENST00000494612 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
SMC4-224ENST00000494612 FANCGO15287 622 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 TRIM37O94972 964 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
SMC4-224ENST00000494612 RASIP1Q5U651 963 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 MPZL3Q6UWV2 235 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 ACSBG1Q96GR2 724 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 CEP44Q9C0F1 390 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 CBX8Q9HC52 389 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 WWC3Q9ULE0 1092 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 CSADQ9Y600 493 aa7.53□□□□□ -1.2
SMC4-224ENST00000494612 DCDC2CA8MYV0 355 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 NFIBO00712 420 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 EOMESO95936 686 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 GSTT1P30711 240 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 AFMP43652 599 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 EAPPQ56P03 285 aaPredicted RBP7.52□□□□□ -1.21
SMC4-224ENST00000494612 ZBTB37Q5TC79 503 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 TPTE2Q6XPS3 522 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 C12orf40Q86WS4 652 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 ANKRD24Q8TF21 1146 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 ASB11Q8WXH4 323 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 OSBPL7Q9BZF2 842 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 PPM1HQ9ULR3 514 aa7.52□□□□□ -1.21
SMC4-224ENST00000494612 ERCC3P19447 782 aa7.51□□□□□ -1.21
SMC4-224ENST00000494612 SRCIN1Q9C0H9 1055 aa7.51□□□□□ -1.21
SMC4-224ENST00000494612 ZP2Q05996 745 aa7.5□□□□□ -1.21
SMC4-224ENST00000494612 IKZF1Q13422 519 aa7.5□□□□□ -1.21
SMC4-224ENST00000494612 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms