RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 HERC5Q9UII4 1024 aaKnown RBP24.13■■□□□ 1.45
SREBF1-216ENST00000490796 PNMA3Q9UL41 463 aa24.13■■□□□ 1.45
SREBF1-216ENST00000490796 NOP58Q9Y2X3 529 aaKnown RBP24.13■■□□□ 1.45
SREBF1-216ENST00000490796 RBBP6Q7Z6E9 1792 aaKnown RBP24.13■■□□□ 1.45
SREBF1-216ENST00000490796 COL2A1P02458 1487 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-216ENST00000490796 ZSWIM8A7E2V4 1837 aa24.12■■□□□ 1.45
SREBF1-216ENST00000490796 RLBP1P12271 317 aa24.12■■□□□ 1.45
SREBF1-216ENST00000490796 ZNF512BQ96KM6 892 aaPredicted RBP24.12■■□□□ 1.45
SREBF1-216ENST00000490796 TBC1D2Q9BYX2 928 aa24.12■■□□□ 1.45
SREBF1-216ENST00000490796 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.12■■□□□ 1.45
SREBF1-216ENST00000490796 PI4KBQ9UBF8 816 aa24.12■■□□□ 1.45
SREBF1-216ENST00000490796 AGTPBP1Q9UPW5 1226 aa24.12■■□□□ 1.45
SREBF1-216ENST00000490796 DOCK1Q14185 1865 aa24.12■■□□□ 1.45
SREBF1-216ENST00000490796 IGSF3O75054 1194 aa24.11■■□□□ 1.45
SREBF1-216ENST00000490796 CYP2E1P05181 493 aaPredicted RBP24.11■■□□□ 1.45
SREBF1-216ENST00000490796 ZAP70P43403 619 aa24.11■■□□□ 1.45
SREBF1-216ENST00000490796 TGFBRAP1Q8WUH2 860 aa24.11■■□□□ 1.45
SREBF1-216ENST00000490796 CCDC8Q9H0W5 538 aaPredicted RBP24.11■■□□□ 1.45
SREBF1-216ENST00000490796 ZBED9Q6R2W3 1325 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 CAP2P40123 477 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 PPP4CP60510 307 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 UBXN2AP68543 259 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 SPP2Q13103 211 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 PABPC4Q13310 644 aaKnown RBP eCLIP24.1■■□□□ 1.45
SREBF1-216ENST00000490796 ERC1Q8IUD2 1116 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 MAPKAPK5Q8IW41 473 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 CRACR2BQ8N4Y2 399 aaPredicted RBP24.1■■□□□ 1.45
SREBF1-216ENST00000490796 ZNF280CQ8ND82 737 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 AS3MTQ9HBK9 375 aa24.1■■□□□ 1.45
SREBF1-216ENST00000490796 DBNLQ9UJU6 430 aaKnown RBP24.1■■□□□ 1.45
SREBF1-216ENST00000490796 USP17L5A8MUK1 530 aa24.09■■□□□ 1.45
SREBF1-216ENST00000490796 MS4A1P11836 297 aa24.09■■□□□ 1.45
SREBF1-216ENST00000490796 PRKCZQ05513 592 aa24.09■■□□□ 1.45
SREBF1-216ENST00000490796 PROCA1Q8NCQ7 364 aaPredicted RBP24.09■■□□□ 1.45
SREBF1-216ENST00000490796 TNPO2O14787 897 aaKnown RBP24.08■■□□□ 1.45
SREBF1-216ENST00000490796 IDH1O75874 414 aaKnown RBP24.08■■□□□ 1.45
SREBF1-216ENST00000490796 CEP85Q6P2H3 762 aa24.08■■□□□ 1.45
SREBF1-216ENST00000490796 NKX2-3Q8TAU0 364 aa24.08■■□□□ 1.45
SREBF1-216ENST00000490796 CYP7A1P22680 504 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 HMGCS2P54868 508 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 MTFR1Q15390 333 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 HSP90AB4PQ58FF6 505 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 TREML2Q5T2D2 321 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 FOXP4Q8IVH2 680 aaPredicted RBP24.07■■□□□ 1.44
SREBF1-216ENST00000490796 SLAIN1Q8ND83 568 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 PANK1Q8TE04 598 aa24.07■■□□□ 1.44
SREBF1-216ENST00000490796 EAF2Q96CJ1 260 aaPredicted RBP24.07■■□□□ 1.44
SREBF1-216ENST00000490796 PIH1D3Q9NQM4 214 aaKnown RBP24.07■■□□□ 1.44
SREBF1-216ENST00000490796 TLR7Q9NYK1 1049 aaKnown RBP24.07■■□□□ 1.44
SREBF1-216ENST00000490796 MKI67P46013 3256 aaKnown RBP24.07■■□□□ 1.44
SREBF1-216ENST00000490796 HLA-DOAP06340 250 aa24.06■■□□□ 1.44
SREBF1-216ENST00000490796 ANKRD13CQ8N6S4 541 aa24.06■■□□□ 1.44
SREBF1-216ENST00000490796 COA7Q96BR5 231 aa24.06■■□□□ 1.44
SREBF1-216ENST00000490796 EXOC6BQ9Y2D4 811 aa24.06■■□□□ 1.44
SREBF1-216ENST00000490796 FLT1P17948 1338 aa24.06■■□□□ 1.44
SREBF1-216ENST00000490796 BRCA2P51587 3418 aa24.06■■□□□ 1.44
SREBF1-216ENST00000490796 ASNSP08243 561 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 CCL5P13501 91 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 ADGRA1Q86SQ6 560 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 AACSQ86V21 672 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 CERS3Q8IU89 383 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 RNF208Q9H0X6 261 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 TAOK2Q9UL54 1235 aa24.05■■□□□ 1.44
SREBF1-216ENST00000490796 MAST2Q6P0Q8 1798 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 ADCY3O60266 1144 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 GCLCP48506 637 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-216ENST00000490796 FLT3LGP49771 235 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 TMOD4Q9NZQ9 345 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 SAP30BPQ9UHR5 308 aaKnown RBP24.04■■□□□ 1.44
SREBF1-216ENST00000490796 PALD1Q9ULE6 856 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 GABRQQ9UN88 632 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 PTPRFP10586 1907 aa24.04■■□□□ 1.44
SREBF1-216ENST00000490796 PHIPQ8WWQ0 1821 aa24.03■■□□□ 1.44
SREBF1-216ENST00000490796 USP5P45974 858 aa24.03■■□□□ 1.44
SREBF1-216ENST00000490796 DYNLL1P63167 89 aaKnown RBP24.03■■□□□ 1.44
SREBF1-216ENST00000490796 MAP3K12Q12852 859 aa24.03■■□□□ 1.44
SREBF1-216ENST00000490796 RRP1BQ14684 758 aaKnown RBP24.03■■□□□ 1.44
SREBF1-216ENST00000490796 FAM110CQ1W6H9 321 aa24.03■■□□□ 1.44
SREBF1-216ENST00000490796 GJB1P08034 283 aa24.02■■□□□ 1.44
SREBF1-216ENST00000490796 MAGEB6Q8N7X4 407 aa24.02■■□□□ 1.44
SREBF1-216ENST00000490796 MIGA1Q8NAN2 632 aa24.02■■□□□ 1.44
SREBF1-216ENST00000490796 GINM1Q9NU53 330 aa24.02■■□□□ 1.44
SREBF1-216ENST00000490796 CEP290O15078 2479 aa24.01■■□□□ 1.43
SREBF1-216ENST00000490796 IRX3P78415 501 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-216ENST00000490796 MTMR2Q13614 643 aa24.01■■□□□ 1.43
SREBF1-216ENST00000490796 SH3D19Q5HYK7 790 aa24.01■■□□□ 1.43
SREBF1-216ENST00000490796 WDR18Q9BV38 432 aa24.01■■□□□ 1.43
SREBF1-216ENST00000490796 ASCC2Q9H1I8 757 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-216ENST00000490796 MGAMO43451 1857 aa24■■□□□ 1.43
SREBF1-216ENST00000490796 HMMRO75330 724 aa24■■□□□ 1.43
SREBF1-216ENST00000490796 GDF11O95390 407 aa24■■□□□ 1.43
SREBF1-216ENST00000490796 BACE1P56817 501 aa24■■□□□ 1.43
SREBF1-216ENST00000490796 BCL11AQ9H165 835 aa24■■□□□ 1.43
SREBF1-216ENST00000490796 IL1RAPL2Q9NP60 686 aa24■■□□□ 1.43
SREBF1-216ENST00000490796 ATAD5Q96QE3 1844 aa23.99■■□□□ 1.43
SREBF1-216ENST00000490796 APBB1O00213 710 aa23.99■■□□□ 1.43
SREBF1-216ENST00000490796 ELNP15502 786 aa23.99■■□□□ 1.43
SREBF1-216ENST00000490796 GJA8P48165 433 aa23.99■■□□□ 1.43
SREBF1-216ENST00000490796 IRF5Q13568 498 aa23.99■■□□□ 1.43
SREBF1-216ENST00000490796 TMED8Q6PL24 325 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms