RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 GPAA1O43292 621 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 CA12O43570 354 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 CTNND1O60716 968 aaKnown RBP13.3□□□□□ -0.28
CPSF7-212ENST00000489728 INHBEP58166 350 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 SREBF2Q12772 1141 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 WNK4Q96J92 1243 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 TRIM34Q9BYJ4 488 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
CPSF7-212ENST00000489728 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 SERPINB13Q9UIV8 391 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 FZD1Q9UP38 647 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 SNCAIPQ9Y6H5 919 aa13.3□□□□□ -0.28
CPSF7-212ENST00000489728 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-212ENST00000489728 PPATQ06203 517 aa13.29□□□□□ -0.28
CPSF7-212ENST00000489728 SLFNL1Q499Z3 407 aa13.29□□□□□ -0.28
CPSF7-212ENST00000489728 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-212ENST00000489728 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
CPSF7-212ENST00000489728 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
CPSF7-212ENST00000489728 MCM9Q9NXL9 1143 aa13.29□□□□□ -0.28
CPSF7-212ENST00000489728 ARPP21Q9UBL0 812 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-212ENST00000489728 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
CPSF7-212ENST00000489728 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
CPSF7-212ENST00000489728 M0R2C6 588 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 AOC2O75106 756 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 CHGBP05060 677 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-212ENST00000489728 SDSP20132 328 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 INPP5BP32019 993 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
CPSF7-212ENST00000489728 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-212ENST00000489728 GRM1Q13255 1194 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 PPIL2Q13356 520 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 SBK1Q52WX2 424 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 ZKSCAN4Q969J2 545 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-212ENST00000489728 OPTNQ96CV9 577 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 NACAP1Q9BZK3 213 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 SWAP70Q9UH65 585 aa13.28□□□□□ -0.28
CPSF7-212ENST00000489728 ATAD5Q96QE3 1844 aa13.27□□□□□ -0.28
CPSF7-212ENST00000489728 GSG1L2A8MUP6 293 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 GSPT1P15170 499 aaKnown RBP13.27□□□□□ -0.29
CPSF7-212ENST00000489728 CAP2P40123 477 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 TM4SF4P48230 202 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 GTF2A2P52657 109 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 GABPAQ06546 454 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 MCMDC2Q4G0Z9 681 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 TATDN1Q6P1N9 297 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 BEGAINQ9BUH8 593 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 DNAJC18Q9H819 358 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 SAGE1Q9NXZ1 904 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 ROBO3Q96MS0 1386 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 PCNTO95613 3336 aa13.27□□□□□ -0.29
CPSF7-212ENST00000489728 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-212ENST00000489728 PATL2C9JE40 543 aaKnown RBP13.26□□□□□ -0.29
CPSF7-212ENST00000489728 PRKAB2O43741 272 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 ASNSP08243 561 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 PLCD1P51178 756 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 RAD50Q92878 1312 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 BAZ2AQ9UIF9 1905 aaKnown RBP13.26□□□□□ -0.29
CPSF7-212ENST00000489728 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
CPSF7-212ENST00000489728 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 USP17L21D6R901 530 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 CXCL11O14625 94 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 ALDH1A1P00352 501 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 CETPP11597 493 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 PTPRAP18433 802 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 GJA5P36382 358 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-212ENST00000489728 SNAPC2Q13487 334 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 BMP2KLQ5H9B9 411 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 CFHR5Q9BXR6 569 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 ZNF287Q9HBT7 754 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 ZCCHC17Q9NP64 241 aaKnown RBP13.25□□□□□ -0.29
CPSF7-212ENST00000489728 PHIPQ8WWQ0 1821 aa13.25□□□□□ -0.29
CPSF7-212ENST00000489728 FAM196BA6NMK8 535 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 HSPA1AP0DMV8 641 aaKnown RBP13.24□□□□□ -0.29
CPSF7-212ENST00000489728 HSPA1BP0DMV9 641 aaKnown RBP13.24□□□□□ -0.29
CPSF7-212ENST00000489728 TDO2P48775 406 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 ALX1Q15699 326 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 C16orf86Q6ZW13 317 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 IFNL3Q8IZI9 196 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 RUFY2Q8WXA3 655 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
CPSF7-212ENST00000489728 FAM227BQ96M60 508 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms