RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 METTL16Q86W50 562 aaKnown RBP14.05□□□□□ -0.16
SCFD1-206ENST00000484733 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 PI4KBQ9UBF8 816 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 FOCADQ5VW36 1801 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 ATAD5Q96QE3 1844 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 ZBED9Q6R2W3 1325 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 LOC285556D6RIA3 1793 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 CAP2P40123 477 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 RAET1EQ8TD07 263 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 SNRKQ9NRH2 765 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 GINM1Q9NU53 330 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 HTTP42858 3142 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 TRIM75PA6NK02 468 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 GRK4P32298 578 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 DIEXFQ68CQ4 756 aaKnown RBP14.04□□□□□ -0.16
SCFD1-206ENST00000484733 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-206ENST00000484733 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 CDK5RAP2Q96SN8 1893 aa14.04□□□□□ -0.16
SCFD1-206ENST00000484733 FOXP4Q8IVH2 680 aaPredicted RBP14.03□□□□□ -0.16
SCFD1-206ENST00000484733 ZNF280CQ8ND82 737 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
SCFD1-206ENST00000484733 PNMA3Q9UL41 463 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 USP17L5A8MUK1 530 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 CAPN2P17655 700 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 ZAP70P43403 619 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 RRP1BQ14684 758 aaKnown RBP14.03□□□□□ -0.16
SCFD1-206ENST00000484733 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 WDR18Q9BV38 432 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 AS3MTQ9HBK9 375 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 AATFQ9NY61 560 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCFD1-206ENST00000484733 PCDH10Q9P2E7 1040 aa14.03□□□□□ -0.16
SCFD1-206ENST00000484733 FAM196BA6NMK8 535 aa14.02□□□□□ -0.16
SCFD1-206ENST00000484733 PRKCZQ05513 592 aa14.02□□□□□ -0.16
SCFD1-206ENST00000484733 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.163e-10■■■□□ 16.3
SCFD1-206ENST00000484733 CERS3Q8IU89 383 aa14.02□□□□□ -0.16
SCFD1-206ENST00000484733 ERC1Q8IUD2 1116 aa14.02□□□□□ -0.16
SCFD1-206ENST00000484733 EAF2Q96CJ1 260 aaPredicted RBP14.02□□□□□ -0.16
SCFD1-206ENST00000484733 PIH1D3Q9NQM4 214 aaKnown RBP14.02□□□□□ -0.16
SCFD1-206ENST00000484733 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.02□□□□□ -0.16
SCFD1-206ENST00000484733 MYO5AQ9Y4I1 1855 aaKnown RBP14.02□□□□□ -0.16
SCFD1-206ENST00000484733 KIAA0100Q14667 2235 aaKnown RBP14.02□□□□□ -0.17
SCFD1-206ENST00000484733 MS4A1P11836 297 aa14.02□□□□□ -0.17
SCFD1-206ENST00000484733 UBXN2AP68543 259 aa14.02□□□□□ -0.17
SCFD1-206ENST00000484733 SPP2Q13103 211 aa14.02□□□□□ -0.17
SCFD1-206ENST00000484733 IRF5Q13568 498 aa14.02□□□□□ -0.17
SCFD1-206ENST00000484733 ADGRA1Q86SQ6 560 aa14.02□□□□□ -0.17
SCFD1-206ENST00000484733 CCDC84Q86UT8 332 aaPredicted RBP14.02□□□□□ -0.17
SCFD1-206ENST00000484733 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
SCFD1-206ENST00000484733 MTFR1Q15390 333 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 PXYLP1Q8TE99 480 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 SMCR8Q8TEV9 937 aaPredicted RBP14.01□□□□□ -0.17
SCFD1-206ENST00000484733 TGFBRAP1Q8WUH2 860 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 CCDC8Q9H0W5 538 aaPredicted RBP14.01□□□□□ -0.17
SCFD1-206ENST00000484733 GABRQQ9UN88 632 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 FLT1P17948 1338 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 GJB1P08034 283 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 FAM110CQ1W6H9 321 aa14.01□□□□□ -0.17
SCFD1-206ENST00000484733 TLR7Q9NYK1 1049 aaKnown RBP14.01□□□□□ -0.17
SCFD1-206ENST00000484733 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
SCFD1-206ENST00000484733 ASNSP08243 561 aa14□□□□□ -0.17
SCFD1-206ENST00000484733 CCL5P13501 91 aa14□□□□□ -0.17
SCFD1-206ENST00000484733 GJA8P48165 433 aa14□□□□□ -0.17
SCFD1-206ENST00000484733 HSP90AB4PQ58FF6 505 aa14□□□□□ -0.17
SCFD1-206ENST00000484733 MAPKAPK5Q8IW41 473 aa14□□□□□ -0.17
SCFD1-206ENST00000484733 SHISA4Q96DD7 197 aa14□□□□□ -0.17
SCFD1-206ENST00000484733 C19orf81C9J6K1 198 aa13.99□□□□□ -0.17
SCFD1-206ENST00000484733 TNPO2O14787 897 aaKnown RBP13.99□□□□□ -0.17
SCFD1-206ENST00000484733 ADCY3O60266 1144 aa13.99□□□□□ -0.17
SCFD1-206ENST00000484733 CYP7A1P22680 504 aa13.99□□□□□ -0.17
SCFD1-206ENST00000484733 FLT3LGP49771 235 aa13.99□□□□□ -0.17
SCFD1-206ENST00000484733 UBE2Q1Q7Z7E8 422 aa13.99□□□□□ -0.17
SCFD1-206ENST00000484733 DNAJC18Q9H819 358 aa13.99□□□□□ -0.17
SCFD1-206ENST00000484733 MYCP01106 439 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 HMGCS2P54868 508 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 ANKRD13CQ8N6S4 541 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 COA7Q96BR5 231 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 HLA-DOAP06340 250 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 HOXA7P31268 230 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 BACE1P56817 501 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 HABP4Q5JVS0 413 aaKnown RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 PANK1Q8TE04 598 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 MORF4L1Q9UBU8 362 aa13.98□□□□□ -0.17
SCFD1-206ENST00000484733 BIN2Q9UBW5 565 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-206ENST00000484733 JAG1P78504 1218 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 CRACR2BQ8N4Y2 399 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-206ENST00000484733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCFD1-206ENST00000484733 TRIM34Q9BYJ4 488 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 PALD1Q9ULE6 856 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 MYH1P12882 1939 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 IDH1O75874 414 aaKnown RBP13.97□□□□□ -0.17
SCFD1-206ENST00000484733 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms