RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 ZC3H12BQ5HYM0 836 aaKnown RBP11.91□□□□□ -0.5
TTC3-218ENST00000484047 WIPI1Q5MNZ9 446 aaPredicted RBP11.91□□□□□ -0.5
TTC3-218ENST00000484047 SCARA3Q6AZY7 606 aa11.91□□□□□ -0.5
TTC3-218ENST00000484047 STRA8Q7Z7C7 330 aa11.91□□□□□ -0.5
TTC3-218ENST00000484047 SLC22A31A6NKX4 558 aa11.9□□□□□ -0.5
TTC3-218ENST00000484047 KATNA1O75449 491 aa11.9□□□□□ -0.5
TTC3-218ENST00000484047 GUCY2FP51841 1108 aa11.9□□□□□ -0.5
TTC3-218ENST00000484047 MCL1Q07820 350 aa11.9□□□□□ -0.5
TTC3-218ENST00000484047 FAM209AQ5JX71 171 aa11.9□□□□□ -0.5
TTC3-218ENST00000484047 YOD1Q5VVQ6 348 aaPredicted RBP11.9□□□□□ -0.5
TTC3-218ENST00000484047 MAPRE3Q9UPY8 281 aa11.9□□□□□ -0.5
TTC3-218ENST00000484047 CCDC163A0A0D9SF12 145 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 GSTP1P09211 210 aaKnown RBP11.9□□□□□ -0.51
TTC3-218ENST00000484047 CCNFP41002 786 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 PPP2R5AQ15172 486 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 INTS3Q68E01 1043 aaKnown RBP11.9□□□□□ -0.51
TTC3-218ENST00000484047 NLRC3Q7RTR2 1065 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 ATL2Q8NHH9 583 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 ZC3H12CQ9C0D7 883 aaKnown RBP11.9□□□□□ -0.51
TTC3-218ENST00000484047 EPN3Q9H201 632 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 DNAJB12Q9NXW2 375 aaKnown RBP11.9□□□□□ -0.51
TTC3-218ENST00000484047 PCDHA4Q9UN74 947 aa11.9□□□□□ -0.51
TTC3-218ENST00000484047 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
TTC3-218ENST00000484047 TRIM46Q7Z4K8 759 aa11.89□□□□□ -0.51
TTC3-218ENST00000484047 GPBAR1Q8TDU6 330 aa11.89□□□□□ -0.51
TTC3-218ENST00000484047 RELTQ969Z4 430 aa11.89□□□□□ -0.51
TTC3-218ENST00000484047 PLPPR2Q96GM1 343 aa11.89□□□□□ -0.51
TTC3-218ENST00000484047 ASPSCR1Q9BZE9 553 aa11.89□□□□□ -0.51
TTC3-218ENST00000484047 ARHGEF4Q9NR80 690 aa11.89□□□□□ -0.51
TTC3-218ENST00000484047 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
TTC3-218ENST00000484047 SHTN1A0MZ66 631 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 PLD2O14939 933 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 PRR20EP86478 221 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 PRR20CP86479 221 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 PRR20DP86480 221 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 PRR20BP86481 221 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 PRR20AP86496 221 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 RUSC1Q9BVN2 902 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 LACRTQ9GZZ8 138 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 EYA4O95677 639 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 SDSP20132 328 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 DBN1Q16643 649 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 LRFN4Q6PJG9 635 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 LRRTM3Q86VH5 581 aa11.88□□□□□ -0.51
TTC3-218ENST00000484047 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
TTC3-218ENST00000484047 TBC1D8BQ0IIM8 1120 aa11.87□□□□□ -0.51
TTC3-218ENST00000484047 FNDC3BQ53EP0 1204 aaKnown RBP11.87□□□□□ -0.51
TTC3-218ENST00000484047 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
TTC3-218ENST00000484047 CCSAPQ6IQ19 270 aaPredicted RBP11.87□□□□□ -0.51
TTC3-218ENST00000484047 ZFP42Q96MM3 310 aa11.87□□□□□ -0.51
TTC3-218ENST00000484047 DHRS4Q9BTZ2 278 aa11.87□□□□□ -0.51
TTC3-218ENST00000484047 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
TTC3-218ENST00000484047 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
TTC3-218ENST00000484047 A0A1W2PQU0 124 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 KIF3BO15066 747 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 PTPRAP18433 802 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 UBE4AQ14139 1066 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 CNNM4Q6P4Q7 775 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 TRIM33Q9UPN9 1127 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 SLC7A5Q01650 507 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.86□□□□□ -0.514e-7■■■□□ 17.3
TTC3-218ENST00000484047 GNPTABQ3T906 1256 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 CDCP2Q5VXM1 449 aa11.86□□□□□ -0.51
TTC3-218ENST00000484047 RAB27AP51159 221 aa11.85□□□□□ -0.51
TTC3-218ENST00000484047 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
TTC3-218ENST00000484047 CDC6Q99741 560 aa11.85□□□□□ -0.51
TTC3-218ENST00000484047 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
TTC3-218ENST00000484047 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
TTC3-218ENST00000484047 SOX1O00570 391 aaPredicted RBP11.84□□□□□ -0.51
TTC3-218ENST00000484047 ECEL1O95672 775 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 CPB1P15086 417 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 PLCG1P19174 1290 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 IKBKEQ14164 716 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 LHFPL2Q6ZUX7 228 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 DNAJC25-GNG10A0A024R161 153 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 RASGRP1O95267 797 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 AP3B2Q13367 1082 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 MLECQ14165 292 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 FAM35AQ86V20 835 aa11.84□□□□□ -0.51
TTC3-218ENST00000484047 POLR2BP30876 1174 aaKnown RBP11.83□□□□□ -0.52
TTC3-218ENST00000484047 RIN3Q8TB24 985 aa11.83□□□□□ -0.52
TTC3-218ENST00000484047 APBA2Q99767 749 aa11.83□□□□□ -0.52
TTC3-218ENST00000484047 KLHL3Q9UH77 587 aa11.83□□□□□ -0.52
TTC3-218ENST00000484047 EPHA1P21709 976 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 MTMR1Q13613 665 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 SV2CQ496J9 727 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 C14orf80Q86SX3 495 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 NAGPAQ9UK23 515 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 FAM86C1Q9NVL1 165 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 ZIM2Q9NZV7 527 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 ATXN7L1Q9ULK2 861 aaPredicted RBP11.82□□□□□ -0.52
TTC3-218ENST00000484047 SNCAIPQ9Y6H5 919 aa11.82□□□□□ -0.52
TTC3-218ENST00000484047 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
TTC3-218ENST00000484047 CREB3O43889 395 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms