RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 FCHSD1Q86WN1 690 aa7.25□□□□□ -1.25
COPA-203ENST00000481040 JAMLQ86YT9 394 aa7.25□□□□□ -1.25
COPA-203ENST00000481040 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
COPA-203ENST00000481040 RRAGCQ9HB90 399 aa7.25□□□□□ -1.25
COPA-203ENST00000481040 ATP8A1Q9Y2Q0 1164 aa7.25□□□□□ -1.25
COPA-203ENST00000481040 FAM153BP0C7A2 387 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 ARAFP10398 606 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 CDKN1CP49918 316 aaPredicted RBP7.24□□□□□ -1.25
COPA-203ENST00000481040 NEUROD1Q13562 356 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 ADAMTSL4Q6UY14 1074 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 VN1R5Q7Z5H4 357 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 NINJ1Q92982 152 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 MFSD3Q96ES6 412 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 SPATA9Q9BWV2 254 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 MKL2Q9ULH7 1088 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 SOX13Q9UN79 622 aa7.24□□□□□ -1.25
COPA-203ENST00000481040 KCNQ2O43526 872 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 POU3F3P20264 500 aaPredicted RBP7.23□□□□□ -1.25
COPA-203ENST00000481040 DGKGP49619 791 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 EXOSC10Q01780 885 aaKnown RBP7.23□□□□□ -1.25
COPA-203ENST00000481040 PCSK7Q16549 785 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 LONRF2Q1L5Z9 754 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 HGSNATQ68CP4 663 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 MPRIPQ6WCQ1 1025 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.23□□□□□ -1.25
COPA-203ENST00000481040 THNSL2Q86YJ6 484 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 NIM1KQ8IY84 436 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 TAB3Q8N5C8 712 aaPredicted RBP7.23□□□□□ -1.25
COPA-203ENST00000481040 CHAC2Q8WUX2 184 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 TMEM40Q8WWA1 233 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 SLC26A8Q96RN1 970 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 FAM126AQ9BYI3 521 aaPredicted RBP7.23□□□□□ -1.25
COPA-203ENST00000481040 MYH16Q9H6N6 1097 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 GABBR1Q9UBS5 961 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 SLC12A7Q9Y666 1083 aa7.23□□□□□ -1.25
COPA-203ENST00000481040 HTR3BO95264 441 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 MYCLP1P12525 358 aaPredicted RBP7.22□□□□□ -1.25
COPA-203ENST00000481040 EIF2AK2P19525 551 aaKnown RBP7.22□□□□□ -1.25
COPA-203ENST00000481040 STAT3P40763 770 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 NCAPHQ15003 741 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 PDZD3Q86UT5 571 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 SGSM3Q96HU1 749 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 IGFLR1Q9H665 355 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 MAGEC2Q9UBF1 373 aaPredicted RBP7.22□□□□□ -1.25
COPA-203ENST00000481040 PRR12Q9ULL5 1215 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 THRAP3Q9Y2W1 955 aaKnown RBP7.22□□□□□ -1.25
COPA-203ENST00000481040 PRR36Q9H6K5 1346 aa7.22□□□□□ -1.25
COPA-203ENST00000481040 ADCY3O60266 1144 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 PEX14O75381 377 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 ESRRAP11474 423 aaPredicted RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 PTPRAP18433 802 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 AMPD1P23109 780 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 CDK8P49336 464 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 PCBP4P57723 403 aaKnown RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 BRDTQ58F21 947 aaPredicted RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 ZC3H12BQ5HYM0 836 aaKnown RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 FAM182BQ5T319 152 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 MAP1SQ66K74 1059 aaPredicted RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 VHLLQ6RSH7 139 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 ZBTB38Q8NAP3 1195 aaPredicted RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 DDX54Q8TDD1 881 aaKnown RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 CCDC136Q96JN2 1154 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 ADAM19Q9H013 955 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 CAAP1Q9H8G2 361 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 DNAJB12Q9NXW2 375 aaKnown RBP7.21□□□□□ -1.26
COPA-203ENST00000481040 EID1Q9Y6B2 187 aa7.21□□□□□ -1.26
COPA-203ENST00000481040 A0A087X0B3 334 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 IRS4O14654 1257 aaPredicted RBP7.2□□□□□ -1.26
COPA-203ENST00000481040 ADAM23O75077 832 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 SELPP16109 830 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 TBC1D8BQ0IIM8 1120 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 MLECQ14165 292 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 ZYXQ15942 572 aaKnown RBP7.2□□□□□ -1.26
COPA-203ENST00000481040 SLC10A6Q3KNW5 377 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 PERM1Q5SV97 790 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 GORABQ5T7V8 394 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 UNC5AQ6ZN44 842 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 CHSY3Q70JA7 882 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 DDX42Q86XP3 938 aaKnown RBP eCLIP7.2□□□□□ -1.26
COPA-203ENST00000481040 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 LRRC47Q8N1G4 583 aaKnown RBP7.2□□□□□ -1.26
COPA-203ENST00000481040 MICALL1Q8N3F8 863 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 UBE2OQ9C0C9 1292 aaKnown RBP7.2□□□□□ -1.26
COPA-203ENST00000481040 EPN3Q9H201 632 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 TCEAL9Q9UHQ7 104 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 LTBP3Q9NS15 1303 aa7.2□□□□□ -1.26
COPA-203ENST00000481040 CCDC163A0A0D9SF12 145 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 IQCA1LA6NCM1 817 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 GFRA2O00451 464 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 SUSD5O60279 629 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 RFPL3O75679 317 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 GSTP1P09211 210 aaKnown RBP7.19□□□□□ -1.26
COPA-203ENST00000481040 ACRP10323 421 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 SOX5P35711 763 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 TBX4P57082 545 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 PABPC4Q13310 644 aaKnown RBP eCLIP7.19□□□□□ -1.26
COPA-203ENST00000481040 AP3B2Q13367 1082 aa7.19□□□□□ -1.26
COPA-203ENST00000481040 CBX2Q14781 532 aaPredicted RBP7.19□□□□□ -1.26
COPA-203ENST00000481040 INTS3Q68E01 1043 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms