RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 STMN3Q9NZ72 180 aa6□□□□□ -1.45
USF3-202ENST00000478658 ABCC8Q09428 1581 aa6□□□□□ -1.45
USF3-202ENST00000478658 ATP5J2-PTCD1G3V325 749 aa6□□□□□ -1.45
USF3-202ENST00000478658 KIF1CO43896 1103 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 GLRX3O76003 335 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 CASP14P31944 242 aa6□□□□□ -1.45
USF3-202ENST00000478658 FKBP4Q02790 459 aaKnown RBP eCLIP6□□□□□ -1.45
USF3-202ENST00000478658 HS2ST1Q7LGA3 356 aa6□□□□□ -1.45
USF3-202ENST00000478658 TRPV6Q9H1D0 765 aa6□□□□□ -1.45
USF3-202ENST00000478658 ECT2Q9H8V3 914 aa6□□□□□ -1.45
USF3-202ENST00000478658 EVA1BQ9NVM1 165 aa6□□□□□ -1.45
USF3-202ENST00000478658 PRKAG2Q9UGJ0 569 aa6□□□□□ -1.45
USF3-202ENST00000478658 KDM1AO60341 852 aa6□□□□□ -1.45
USF3-202ENST00000478658 ERCC3P19447 782 aa6□□□□□ -1.45
USF3-202ENST00000478658 NEK2P51955 445 aa6□□□□□ -1.45
USF3-202ENST00000478658 RIPK4P57078 832 aa6□□□□□ -1.45
USF3-202ENST00000478658 KRT76Q01546 638 aa6□□□□□ -1.45
USF3-202ENST00000478658 LRMPQ12912 555 aa6□□□□□ -1.45
USF3-202ENST00000478658 MTMR3Q13615 1198 aa6□□□□□ -1.45
USF3-202ENST00000478658 GIPC2Q8TF65 315 aa6□□□□□ -1.45
USF3-202ENST00000478658 MRPS27Q92552 414 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 LRGUKQ96M69 825 aa6□□□□□ -1.45
USF3-202ENST00000478658 TUBB6Q9BUF5 446 aa6□□□□□ -1.45
USF3-202ENST00000478658 CHCHD3Q9NX63 227 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 MYH10P35580 1976 aa6□□□□□ -1.45
USF3-202ENST00000478658 KRT86O43790 486 aa6□□□□□ -1.45
USF3-202ENST00000478658 TYRO3Q06418 890 aa6□□□□□ -1.45
USF3-202ENST00000478658 PPP1R7Q15435 360 aa6□□□□□ -1.45
USF3-202ENST00000478658 TRIM71Q2Q1W2 868 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 ARHGEF2Q92974 986 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 FAM81BQ96LP2 452 aa6□□□□□ -1.45
USF3-202ENST00000478658 TINF2Q9BSI4 451 aa6□□□□□ -1.45
USF3-202ENST00000478658 TSPYL4Q9UJ04 414 aa6□□□□□ -1.45
USF3-202ENST00000478658 MCM4P33991 863 aa6□□□□□ -1.45
USF3-202ENST00000478658 KRBA2Q6ZNG9 492 aa6□□□□□ -1.45
USF3-202ENST00000478658 TSKSQ9UJT2 592 aa6□□□□□ -1.45
USF3-202ENST00000478658 PPME1Q9Y570 386 aa6□□□□□ -1.45
USF3-202ENST00000478658 USP47Q96K76 1375 aa6□□□□□ -1.45
USF3-202ENST00000478658 MAFGO15525 162 aa6□□□□□ -1.45
USF3-202ENST00000478658 SMARCA5O60264 1052 aaPredicted RBP6□□□□□ -1.45
USF3-202ENST00000478658 SLC5A1P13866 664 aa6□□□□□ -1.45
USF3-202ENST00000478658 XPAP23025 273 aaPredicted RBP6□□□□□ -1.45
USF3-202ENST00000478658 LONP1P36776 959 aaKnown RBP6□□□□□ -1.45
USF3-202ENST00000478658 MLECQ14165 292 aa6□□□□□ -1.45
USF3-202ENST00000478658 OGFOD1Q8N543 542 aa6□□□□□ -1.45
USF3-202ENST00000478658 TUBGCP2Q9BSJ2 902 aa6□□□□□ -1.45
USF3-202ENST00000478658 TEX13AQ9BXU3 409 aaPredicted RBP6□□□□□ -1.45
USF3-202ENST00000478658 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
USF3-202ENST00000478658 EFCC1Q9HA90 598 aa6□□□□□ -1.45
USF3-202ENST00000478658 CFAP221Q4G0U5 840 aa6□□□□□ -1.45
USF3-202ENST00000478658 DENND2CQ68D51 928 aa6□□□□□ -1.45
USF3-202ENST00000478658 KIRREL3Q8IZU9 778 aa6□□□□□ -1.45
USF3-202ENST00000478658 ENGASEQ8NFI3 743 aa6□□□□□ -1.45
USF3-202ENST00000478658 IRAK4Q9NWZ3 460 aa6□□□□□ -1.45
USF3-202ENST00000478658 CEP104O60308 925 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 SRGAP2CP0DJJ0 459 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PHKA1P46020 1223 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 MRPL28Q13084 256 aaKnown RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 NBPF8Q3BBV2 869 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 UBE3BQ7Z3V4 1068 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 SYCE1Q8N0S2 351 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PKD2L2Q9NZM6 624 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 UTP11Q9Y3A2 253 aaKnown RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 GTPBP10A4D1E9 387 aaKnown RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 POTEFA5A3E0 1075 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 POTEIP0CG38 1075 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PYGBP11216 843 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
USF3-202ENST00000478658 NLRP9Q7RTR0 991 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 JADE2Q9NQC1 790 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 CCNB2O95067 398 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 MYCNP04198 464 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 MAPK1P28482 360 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 SSRP1Q08945 709 aaKnown RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 LRRC23Q53EV4 343 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 GPATCH4Q5T3I0 446 aaKnown RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 SIRT1Q96EB6 747 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 CENPKQ9BS16 269 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 LCMT1Q9UIC8 334 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 MID2Q9UJV3 735 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 ARHGAP42A6NI28 874 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 SLC9A1P19634 815 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PTPREP23469 700 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PSMD7P51665 324 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 FOXD4L5Q5VV16 416 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 TTC23Q5W5X9 447 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 BLOC1S2Q6QNY1 142 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 FOXD4L4Q8WXT5 416 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 UIMC1Q96RL1 719 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 KRCC1Q9NPI7 259 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 DMRT2Q9Y5R5 561 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 CAPN7Q9Y6W3 813 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 BTBD18B2RXH4 712 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 HNRNPMP52272 730 aaKnown RBP eCLIP5.99□□□□□ -1.45
USF3-202ENST00000478658 TRIM14Q14142 442 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 HERC4Q5GLZ8 1057 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 PDZD8Q8NEN9 1154 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PSDA5PKW4 1024 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 TTC31Q49AM3 519 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 KRT80Q6KB66 452 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms