RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 TMEM67Q5HYA8 995 aa7.03□□□□□ -1.28
RPSA-205ENST00000475346 CT47A1Q5JQC4 288 aaPredicted RBP7.03□□□□□ -1.28
RPSA-205ENST00000475346 CEP135Q66GS9 1140 aa7.03□□□□□ -1.28
RPSA-205ENST00000475346 NIM1KQ8IY84 436 aa7.03□□□□□ -1.28
RPSA-205ENST00000475346 TM9SF2Q99805 663 aa7.03□□□□□ -1.28
RPSA-205ENST00000475346 EFCC1Q9HA90 598 aa7.03□□□□□ -1.28
RPSA-205ENST00000475346 TCEAL9Q9UHQ7 104 aa7.03□□□□□ -1.28
RPSA-205ENST00000475346 THRAP3Q9Y2W1 955 aaKnown RBP7.03□□□□□ -1.28
RPSA-205ENST00000475346 SMNDC1O75940 238 aaKnown RBP eCLIP7.02□□□□□ -1.29
RPSA-205ENST00000475346 ATE1O95260 518 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 ADH6P28332 368 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 TBX4P57082 545 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 KCNMA1Q12791 1236 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 TM4SF20Q53R12 229 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 MAP1SQ66K74 1059 aaPredicted RBP7.02□□□□□ -1.29
RPSA-205ENST00000475346 VHLLQ6RSH7 139 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 SLCO4C1Q6ZQN7 724 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 THNSL2Q86YJ6 484 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 RAVER1Q8IY67 606 aaKnown RBP7.02□□□□□ -1.29
RPSA-205ENST00000475346 BEND7Q8N7W2 519 aaPredicted RBP7.02□□□□□ -1.29
RPSA-205ENST00000475346 UBR7Q8N806 425 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 TMEM40Q8WWA1 233 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 SPATA9Q9BWV2 254 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 KLF15Q9UIH9 416 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 PCDHB10Q9UN67 800 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 EID1Q9Y6B2 187 aa7.02□□□□□ -1.29
RPSA-205ENST00000475346 FAM86C2PA6NEL3 165 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 EPXP11678 715 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 POU3F3P20264 500 aaPredicted RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 STAT3P40763 770 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 ZYXQ15942 572 aaKnown RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 AXDND1Q5T1B0 1012 aaPredicted RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 FAM182BQ5T319 152 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 HGSNATQ68CP4 663 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 ADAMTSL4Q6UY14 1074 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 FCHSD1Q86WN1 690 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 DDX42Q86XP3 938 aaKnown RBP eCLIP7.01□□□□□ -1.29
RPSA-205ENST00000475346 MORC4Q8TE76 937 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 NINJ1Q92982 152 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 ZNF669Q96BR6 464 aaPredicted RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 BTBD6Q96KE9 485 aa7.01□□□□□ -1.29
RPSA-205ENST00000475346 MAGEC2Q9UBF1 373 aaPredicted RBP7.01□□□□□ -1.29
RPSA-205ENST00000475346 MEIS3P2A8K0S8 358 aa7□□□□□ -1.29
RPSA-205ENST00000475346 KCNQ2O43526 872 aa7□□□□□ -1.29
RPSA-205ENST00000475346 PRC1O43663 620 aa7□□□□□ -1.29
RPSA-205ENST00000475346 HTR3BO95264 441 aa7□□□□□ -1.29
RPSA-205ENST00000475346 NFKB2Q00653 900 aa7□□□□□ -1.29
RPSA-205ENST00000475346 EXOSC10Q01780 885 aaKnown RBP7□□□□□ -1.29
RPSA-205ENST00000475346 ZNF252P-AS1Q0IIN9 211 aa7□□□□□ -1.29
RPSA-205ENST00000475346 ZNF468Q5VIY5 522 aaPredicted RBP7□□□□□ -1.29
RPSA-205ENST00000475346 VN1R5Q7Z5H4 357 aa7□□□□□ -1.29
RPSA-205ENST00000475346 WDR75Q8IWA0 830 aaKnown RBP7□□□□□ -1.29
RPSA-205ENST00000475346 CCAR1Q8IX12 1150 aaKnown RBP7□□□□□ -1.29
RPSA-205ENST00000475346 MICALL1Q8N3F8 863 aa7□□□□□ -1.29
RPSA-205ENST00000475346 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
RPSA-205ENST00000475346 LACRTQ9GZZ8 138 aa7□□□□□ -1.29
RPSA-205ENST00000475346 CAAP1Q9H8G2 361 aa7□□□□□ -1.29
RPSA-205ENST00000475346 DNAJB12Q9NXW2 375 aaKnown RBP7□□□□□ -1.29
RPSA-205ENST00000475346 CORINQ9Y5Q5 1042 aa7□□□□□ -1.29
RPSA-205ENST00000475346 ADCY3O60266 1144 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 SUSD5O60279 629 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 PDE8AO60658 829 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 GSK3AP49840 483 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 PABPC4Q13310 644 aaKnown RBP eCLIP6.99□□□□□ -1.294e-17■■■■■ 40.5
RPSA-205ENST00000475346 NCAPHQ15003 741 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 SLC10A6Q3KNW5 377 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 OVOS1Q6IE37 1185 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 UNC5AQ6ZN44 842 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 LRRC47Q8N1G4 583 aaKnown RBP6.99□□□□□ -1.29
RPSA-205ENST00000475346 ZBTB38Q8NAP3 1195 aaPredicted RBP6.99□□□□□ -1.29
RPSA-205ENST00000475346 TSR2Q969E8 191 aaKnown RBP6.99□□□□□ -1.29
RPSA-205ENST00000475346 ACSBG1Q96GR2 724 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 SLC26A8Q96RN1 970 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 ZC3H12CQ9C0D7 883 aaKnown RBP6.99□□□□□ -1.29
RPSA-205ENST00000475346 MCM8Q9UJA3 840 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 MKL2Q9ULH7 1088 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 PCDHA4Q9UN74 947 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 SOX13Q9UN79 622 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 SLC12A7Q9Y666 1083 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 LTBP3Q9NS15 1303 aa6.99□□□□□ -1.29
RPSA-205ENST00000475346 A0A087X0B3 334 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 ESRRAP11474 423 aaPredicted RBP6.98□□□□□ -1.29
RPSA-205ENST00000475346 CPB1P15086 417 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 PTPRAP18433 802 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 ALAS2P22557 587 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 L1CAMP32004 1257 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 SOX5P35711 763 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 MLECQ14165 292 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 WIPI1Q5MNZ9 446 aaPredicted RBP6.98□□□□□ -1.29
RPSA-205ENST00000475346 PERM1Q5SV97 790 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 KIAA1211LQ6NV74 962 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 CHSY3Q70JA7 882 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 PDZD3Q86UT5 571 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 PMM1Q92871 262 aa6.98□□□□□ -1.29
RPSA-205ENST00000475346 FAM177BA6PVY3 158 aa6.97□□□□□ -1.29
RPSA-205ENST00000475346 RAPGEF3O95398 923 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms