RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 OR6P1Q8NGX9 317 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 PRKAG3Q9UGI9 489 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 PPT2Q9UMR5 302 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 TNIKQ9UKE5 1360 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 KDM5BQ9UGL1 1544 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 FSCN2O14926 492 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 NFE2L2Q16236 605 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
CKS1B-204ENST00000471245 KLHL23Q8NBE8 558 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 MKL1Q969V6 931 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 CORO1BQ9BR76 489 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 ZSWIM4Q9H7M6 989 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 ZNRF3Q9ULT6 936 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 MRVI1Q9Y6F6 885 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
CKS1B-204ENST00000471245 CFAP43Q8NDM7 1665 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 KLF4O43474 513 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 GDF11O95390 407 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 GIPRP48546 466 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 EIF6P56537 245 aaKnown RBP8.34□□□□□ -1.07
CKS1B-204ENST00000471245 PTPN11Q06124 597 aaPredicted RBP8.34□□□□□ -1.07
CKS1B-204ENST00000471245 SETDB1Q15047 1291 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 HGSNATQ68CP4 663 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 TXNDC11Q6PKC3 985 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 ANKS3Q6ZW76 656 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 RBBP8NLQ8NC74 664 aaPredicted RBP8.34□□□□□ -1.07
CKS1B-204ENST00000471245 ANAPC16Q96DE5 110 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 FERD3LQ96RJ6 166 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 PIF1Q9H611 641 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 EHMT1Q9H9B1 1298 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 BRMS1Q9HCU9 246 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 TMA7Q9Y2S6 64 aaKnown RBP8.34□□□□□ -1.07
CKS1B-204ENST00000471245 CARMIL2Q6F5E8 1435 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 UACAQ9BZF9 1416 aa8.34□□□□□ -1.07
CKS1B-204ENST00000471245 DLL1O00548 723 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 DEAF1O75398 565 aaPredicted RBP8.33□□□□□ -1.08
CKS1B-204ENST00000471245 ATE1O95260 518 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 CDC25BP30305 580 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 MCM4P33991 863 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 RAB33AQ14088 237 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 POU4F3Q15319 338 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 HP1BP3Q5SSJ5 553 aaPredicted RBP8.33□□□□□ -1.08
CKS1B-204ENST00000471245 IGF2-ASQ6U949 168 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 CCDC81Q6ZN84 652 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 KCNB2Q92953 911 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 SIRPGQ9P1W8 387 aa8.33□□□□□ -1.08
CKS1B-204ENST00000471245 TM4SF5O14894 197 aa8.32□□□□□ -1.08
CKS1B-204ENST00000471245 GPBAR1Q8TDU6 330 aa8.32□□□□□ -1.08
CKS1B-204ENST00000471245 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
CKS1B-204ENST00000471245 CRBNQ96SW2 442 aa8.32□□□□□ -1.08
CKS1B-204ENST00000471245 TRIM55Q9BYV6 548 aa8.32□□□□□ -1.08
CKS1B-204ENST00000471245 TACC3Q9Y6A5 838 aa8.32□□□□□ -1.08
CKS1B-204ENST00000471245 DISP1Q96F81 1524 aa8.32□□□□□ -1.08
CKS1B-204ENST00000471245 PRR36Q9H6K5 1346 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 ADAMTSL3P82987 1691 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 C9orf172C9J069 976 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 K7ELQ4 463 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-204ENST00000471245 MAOBP27338 520 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-204ENST00000471245 CLCQ05315 142 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 MPRIPQ6WCQ1 1025 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-204ENST00000471245 GK5Q6ZS86 529 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 ACSBG1Q96GR2 724 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 CCDC86Q9H6F5 360 aaKnown RBP8.31□□□□□ -1.08
CKS1B-204ENST00000471245 PCDHA4Q9UN74 947 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-204ENST00000471245 SNCAIPQ9Y6H5 919 aa8.31□□□□□ -1.08
CKS1B-204ENST00000471245 KIF27Q86VH2 1401 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 TLDC2A0PJX2 215 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 KRBA1A5PL33 1030 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
CKS1B-204ENST00000471245 SELPP16109 830 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 BMS1Q14692 1282 aaKnown RBP8.3□□□□□ -1.08
CKS1B-204ENST00000471245 XP32Q5T750 250 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 ZNF746Q6NUN9 644 aaPredicted RBP8.3□□□□□ -1.08
CKS1B-204ENST00000471245 LRP10Q7Z4F1 713 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 HNRNPLLQ8WVV9 542 aaKnown RBP8.3□□□□□ -1.08
CKS1B-204ENST00000471245 CARD10Q9BWT7 1032 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 CDK11AQ9UQ88 783 aaPredicted RBP8.3□□□□□ -1.08
CKS1B-204ENST00000471245 R3HCC1Q9Y3T6 440 aaKnown RBP8.3□□□□□ -1.08
CKS1B-204ENST00000471245 PCDHB14Q9Y5E9 798 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 LMTK3Q96Q04 1460 aa8.3□□□□□ -1.08
CKS1B-204ENST00000471245 MAGI3Q5TCQ9 1506 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 MEIS3P2A8K0S8 358 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 GFRA2O00451 464 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 SMAD7O15105 426 aaKnown RBP8.29□□□□□ -1.08
CKS1B-204ENST00000471245 ZNF862O60290 1169 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 ECEL1O95672 775 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 APBA3O96018 575 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 IGHA1P01876 353 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 KIF4BQ2VIQ3 1234 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 WIPI1Q5MNZ9 446 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-204ENST00000471245 LSRQ86X29 649 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-204ENST00000471245 FAM169BQ8N8A8 192 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms