RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 MKRN3Q13064 507 aaKnown RBP23.77■■□□□ 1.4
HDAC7-220ENST00000471235 SPRYD7Q5W111 196 aa23.77■■□□□ 1.4
HDAC7-220ENST00000471235 RILPL2Q969X0 211 aa23.77■■□□□ 1.4
HDAC7-220ENST00000471235 DCP1AQ9NPI6 582 aaPredicted RBP23.77■■□□□ 1.4
HDAC7-220ENST00000471235 PI4KBQ9UBF8 816 aa23.77■■□□□ 1.4
HDAC7-220ENST00000471235 GPAA1O43292 621 aa23.76■■□□□ 1.39
HDAC7-220ENST00000471235 HLA-DOAP06340 250 aa23.76■■□□□ 1.39
HDAC7-220ENST00000471235 GJA5P36382 358 aa23.76■■□□□ 1.39
HDAC7-220ENST00000471235 NOL9Q5SY16 702 aaKnown RBP23.76■■□□□ 1.39
HDAC7-220ENST00000471235 TTC22Q5TAA0 569 aa23.76■■□□□ 1.39
HDAC7-220ENST00000471235 STRBPQ96SI9 672 aaKnown RBP23.76■■□□□ 1.39
HDAC7-220ENST00000471235 SEC62Q99442 399 aaKnown RBP23.76■■□□□ 1.39
HDAC7-220ENST00000471235 DNAJC18Q9H819 358 aa23.76■■□□□ 1.39
HDAC7-220ENST00000471235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.76■■□□□ 1.39
HDAC7-220ENST00000471235 HERC5Q9UII4 1024 aaKnown RBP23.76■■□□□ 1.39
HDAC7-220ENST00000471235 SLC4A4Q9Y6R1 1079 aa23.76■■□□□ 1.39
HDAC7-220ENST00000471235 LAMA4Q16363 1823 aa23.75■■□□□ 1.39
HDAC7-220ENST00000471235 GSPT1P15170 499 aaKnown RBP23.75■■□□□ 1.39
HDAC7-220ENST00000471235 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
HDAC7-220ENST00000471235 CNKSR2Q8WXI2 1034 aa23.75■■□□□ 1.39
HDAC7-220ENST00000471235 OPTNQ96CV9 577 aa23.75■■□□□ 1.39
HDAC7-220ENST00000471235 ATP8A2Q9NTI2 1148 aa23.75■■□□□ 1.39
HDAC7-220ENST00000471235 SPDYE5A6NIY4 337 aa23.74■■□□□ 1.39
HDAC7-220ENST00000471235 ZBTB48P10074 688 aaPredicted RBP23.74■■□□□ 1.39
HDAC7-220ENST00000471235 METTL16Q86W50 562 aaKnown RBP23.74■■□□□ 1.39
HDAC7-220ENST00000471235 MCM9Q9NXL9 1143 aa23.74■■□□□ 1.39
HDAC7-220ENST00000471235 PCNTO95613 3336 aa23.74■■□□□ 1.39
HDAC7-220ENST00000471235 TICAM2Q86XR7 235 aa23.73■■□□□ 1.39
HDAC7-220ENST00000471235 EHD4Q9H223 541 aa23.73■■□□□ 1.39
HDAC7-220ENST00000471235 LOC285556D6RIA3 1793 aa23.73■■□□□ 1.39
HDAC7-220ENST00000471235 A0A0D9SFI3 127 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 CYP2D6P10635 497 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 EVX2Q03828 476 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 ERICH6BQ5W0A0 696 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 TTC6Q86TZ1 520 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 SKAP1Q86WV1 359 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 SCYL3Q8IZE3 742 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 CRACR2BQ8N4Y2 399 aaPredicted RBP23.72■■□□□ 1.39
HDAC7-220ENST00000471235 OTUD5Q96G74 571 aa23.72■■□□□ 1.39
HDAC7-220ENST00000471235 POLR3DP05423 398 aaPredicted RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 HSPA1AP0DMV8 641 aaKnown RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 HSPA1BP0DMV9 641 aaKnown RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 PLCD1P51178 756 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 MAP2K1Q02750 393 aaPredicted RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 RRP1BQ14684 758 aaKnown RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 CCDC129Q6ZRS4 1044 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 ERO1BQ86YB8 467 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 FOXP4Q8IVH2 680 aaPredicted RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 FAM227BQ96M60 508 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 TRIM34Q9BYJ4 488 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 WBP1LQ9NX94 342 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 SERPINB13Q9UIV8 391 aa23.71■■□□□ 1.39
HDAC7-220ENST00000471235 GREB1LQ9C091 1923 aaPredicted RBP23.71■■□□□ 1.39
HDAC7-220ENST00000471235 GSG1L2A8MUP6 293 aa23.7■■□□□ 1.38
HDAC7-220ENST00000471235 CTNND1O60716 968 aaKnown RBP23.7■■□□□ 1.38
HDAC7-220ENST00000471235 GNAT2P19087 354 aa23.7■■□□□ 1.38
HDAC7-220ENST00000471235 NMIQ13287 307 aaPredicted RBP23.7■■□□□ 1.38
HDAC7-220ENST00000471235 EPB41L4AQ9HCS5 686 aaPredicted RBP23.7■■□□□ 1.38
HDAC7-220ENST00000471235 HELLSQ9NRZ9 838 aa23.7■■□□□ 1.38
HDAC7-220ENST00000471235 SDSP20132 328 aa23.69■■□□□ 1.38
HDAC7-220ENST00000471235 PPIL2Q13356 520 aa23.69■■□□□ 1.38
HDAC7-220ENST00000471235 DDRGK1Q96HY6 314 aa23.69■■□□□ 1.38
HDAC7-220ENST00000471235 PPP4R2Q9NY27 417 aa23.69■■□□□ 1.38
HDAC7-220ENST00000471235 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.69■■□□□ 1.38
HDAC7-220ENST00000471235 CYP2D7A0A087X1C5 515 aa23.68■■□□□ 1.38
HDAC7-220ENST00000471235 GABPAQ06546 454 aa23.68■■□□□ 1.38
HDAC7-220ENST00000471235 REM2Q8IYK8 340 aaPredicted RBP23.68■■□□□ 1.38
HDAC7-220ENST00000471235 PICK1Q9NRD5 415 aa23.68■■□□□ 1.38
HDAC7-220ENST00000471235 MANSC4A6NHS7 340 aaPredicted RBP23.67■■□□□ 1.38
HDAC7-220ENST00000471235 USP17L12C9JPN9 530 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 USP17L21D6R901 530 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 CAP2P40123 477 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 PPATQ06203 517 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 SREBF2Q12772 1141 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 GIMAP6Q6P9H5 292 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 CTR9Q6PD62 1173 aa23.67■■□□□ 1.38
HDAC7-220ENST00000471235 ARPP21Q9UBL0 812 aaPredicted RBP23.67■■□□□ 1.38
HDAC7-220ENST00000471235 SMIM22K7EJ46 135 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 FOXP2O15409 715 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 PTPRAP18433 802 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 SHMT1P34896 483 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 SHROOM1Q2M3G4 852 aaPredicted RBP23.66■■□□□ 1.38
HDAC7-220ENST00000471235 MCMDC2Q4G0Z9 681 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 AMOTL1Q8IY63 956 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 DIAPH3Q9NSV4 1193 aa23.66■■□□□ 1.38
HDAC7-220ENST00000471235 ROBO3Q96MS0 1386 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 IRF6O14896 467 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 GDF11O95390 407 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 TM4SF4P48230 202 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 TDO2P48775 406 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 JAG1P78504 1218 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 TATDN1Q6P1N9 297 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 ZNF589Q86UQ0 364 aaPredicted RBP23.65■■□□□ 1.38
HDAC7-220ENST00000471235 CCDC84Q86UT8 332 aaPredicted RBP23.65■■□□□ 1.38
HDAC7-220ENST00000471235 MS4A4AQ96JQ5 239 aa23.65■■□□□ 1.38
HDAC7-220ENST00000471235 CCDC171Q6TFL3 1326 aa23.64■■□□□ 1.38
HDAC7-220ENST00000471235 PATL2C9JE40 543 aaKnown RBP23.64■■□□□ 1.37
HDAC7-220ENST00000471235 HIP1O00291 1037 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 FOXN1O15353 648 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms