RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ARFGAP3Q9NP61 516 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 MYO5AQ9Y4I1 1855 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 PARP4Q9UKK3 1724 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 MAP3K15Q6ZN16 1313 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 UBR2Q8IWV8 1755 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 POLR2DO15514 142 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 PTPREP23469 700 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 NR1I3Q14994 352 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 FAM89AQ96GI7 184 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 RAI14Q9P0K7 980 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 TCIRG1Q13488 830 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 TMEM67Q5HYA8 995 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 GOLGA1Q92805 767 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 TRERF1Q96PN7 1200 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 PRDM11Q9NQV5 511 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 TACC3Q9Y6A5 838 aa14.86□□□□□ -0.03
PDZRN3-205ENST00000466780 SPATA31A3Q5VYP0 1347 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 STK36Q9NRP7 1315 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 A0A0U1RQJ8 604 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 SOWAHDA6NJG2 315 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 CSF1RP07333 972 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 CCDC12Q8WUD4 166 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 ATRIPQ8WXE1 791 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 HOOK1Q9UJC3 728 aaKnown RBP14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 KCNJ14Q9UNX9 436 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 RIPOR2Q9Y4F9 1068 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 ZNF532Q9HCE3 1301 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 FMNL1O95466 1100 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 IFIT5Q13325 482 aaKnown RBP14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 APTXQ7Z2E3 356 aaKnown RBP14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 TXLNBQ8N3L3 684 aa14.85□□□□□ -0.03
PDZRN3-205ENST00000466780 A0A1B0GTH6 734 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 IDH1O75874 414 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 MMP1P03956 469 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 TXLNAP40222 546 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 GYS2P54840 703 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 UBE3CQ15386 1083 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 LONRF2Q1L5Z9 754 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 METTL24Q5JXM2 366 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 USP49Q70CQ1 688 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 NUTM2AQ8IVF1 878 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 DIS3L2Q8IYB7 885 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 SYNE4Q8N205 404 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 ZNF330Q9Y3S2 320 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 H3BQF6 201 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 TEX33O43247 280 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 ACTN4O43707 911 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 RAD9BQ6WBX8 426 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 PLA2G12BQ9BX93 195 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 ZSWIM4Q9H7M6 989 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 ZSWIM5Q9P217 1185 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 DACH1Q9UI36 760 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 WWC3Q9ULE0 1092 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 PCDHB6Q9Y5E3 794 aa14.84□□□□□ -0.03
PDZRN3-205ENST00000466780 PDE6AP16499 860 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 IFNAR1P17181 557 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 LIFRP42702 1097 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 RAD51AP2Q09MP3 1159 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 SPATA20Q8TB22 786 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 ADGRG1Q9Y653 693 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 SLC12A7Q9Y666 1083 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 LRP6O75581 1613 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 TCRBV5S4A2TA0A5A2 114 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 CCDC151A5D8V7 595 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 AKR1B15C9JRZ8 316 aaPredicted RBP14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 PCCAP05165 728 aaPredicted RBP14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 CCDC175P0C221 793 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 PLCD1P51178 756 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 PANX2Q96RD6 677 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 LZTFL1Q9NQ48 299 aa14.83□□□□□ -0.04
PDZRN3-205ENST00000466780 MAP2K7O14733 419 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 HSPA2P54652 639 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 CTDSPL2Q05D32 466 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 NR5A1Q13285 461 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 ZNF512BQ96KM6 892 aaPredicted RBP14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 EPB41L4AQ9HCS5 686 aaPredicted RBP14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 CHMP4BP1P59074 171 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 TRIM28Q13263 835 aaKnown RBP14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 SRGAP1Q7Z6B7 1085 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 ZNF579Q8NAF0 562 aaKnown RBP14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 ANKZF1Q9H8Y5 726 aa14.82□□□□□ -0.04
PDZRN3-205ENST00000466780 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 RBL2Q08999 1139 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 BRD3Q15059 726 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 TTF1Q15361 905 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 RILPL1Q5EBL4 403 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 JAKMIP3Q5VZ66 844 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 LDHAL6AQ6ZMR3 332 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 TTLL11Q8NHH1 800 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 PCDH11XQ9BZA7 1347 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 PCDH11YQ9BZA8 1340 aa14.81□□□□□ -0.04
PDZRN3-205ENST00000466780 ERVV-2B6SEH9 535 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms