RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TEX33O43247 280 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 TFRCP02786 760 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 PROSER2Q86WR7 435 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 CCDC12Q8WUD4 166 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 ZKSCAN3Q9BRR0 538 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 MYH6P13533 1939 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 STX10O60499 249 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 CASP1P29466 404 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 NR5A1Q13285 461 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 SMC1AQ14683 1233 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 LZTFL1Q9NQ48 299 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 FBXO2Q9UK22 296 aaPredicted RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 PCDHB6Q9Y5E3 794 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 IFIT5Q13325 482 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 GPR161Q8N6U8 529 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 DIS3L2Q8IYB7 885 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 CPLX3Q8WVH0 158 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 GREM2Q9H772 168 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 EPB41L4AQ9HCS5 686 aaPredicted RBP13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 RAI14Q9P0K7 980 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
PDZRN3-203ENST00000462146 FAM193AP78312 1265 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 MORC3Q14149 939 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 FUT8Q9BYC5 575 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 VGLL3A8MV65 326 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 H3BQF6 201 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 PDE6AP16499 860 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 GPTP24298 496 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 PHKA1P46020 1223 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 STX17P56962 302 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 RAD9BQ6WBX8 426 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 OXER1Q8TDS5 423 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 RIPOR2Q9Y4F9 1068 aa13.42□□□□□ -0.26
PDZRN3-203ENST00000462146 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 COBLO75128 1261 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 ATRNO75882 1429 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 MMP1P03956 469 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 TPM1P09493 284 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 SARSP49591 514 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 MAPK8IP2Q13387 824 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 NR1I3Q14994 352 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 MST1RQ04912 1400 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 ITGA6P23229 1130 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 ENOX1Q8TC92 643 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 ARFGAP3Q9NP61 516 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 LRP6O75581 1613 aa13.41□□□□□ -0.26
PDZRN3-203ENST00000462146 A0A087X0B3 334 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 TULP2O00295 520 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 ABL1P00519 1130 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 CSF1RP07333 972 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 PTPREP23469 700 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 NT5DC1Q5TFE4 455 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 GOLGA1Q92805 767 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 MYH3P11055 1940 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 SNAP23O00161 211 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 MYO1BO43795 1136 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 RBL2Q08999 1139 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 RAD51AP2Q09MP3 1159 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 HELBQ8NG08 1087 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
PDZRN3-203ENST00000462146 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 AFMP43652 599 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 RABGGTAQ92696 567 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 AIDAQ96BJ3 306 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 SUGCTQ9HAC7 445 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 CNNM1Q9NRU3 951 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 ABCC12Q96J65 1359 aa13.4□□□□□ -0.27
PDZRN3-203ENST00000462146 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 PRKAB2O43741 272 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 HLFQ16534 295 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 ARMT1Q9H993 441 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms