RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PARK7Q99497 189 aaKnown RBP12.21□□□□□ -0.45
HDLBP-228ENST00000459788 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
HDLBP-228ENST00000459788 ADGRA2Q96PE1 1338 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 ZAP70P43403 619 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 C17orf99Q6UX52 265 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 AACSQ86V21 672 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-228ENST00000459788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDLBP-228ENST00000459788 SNRKQ9NRH2 765 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
HDLBP-228ENST00000459788 MYH8P13535 1937 aa12.19□□□□□ -0.46
HDLBP-228ENST00000459788 PDHXO00330 501 aa12.19□□□□□ -0.46
HDLBP-228ENST00000459788 CAP2P40123 477 aa12.19□□□□□ -0.46
HDLBP-228ENST00000459788 LACTBP83111 547 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-228ENST00000459788 NBPF11Q86T75 865 aa12.19□□□□□ -0.46
HDLBP-228ENST00000459788 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-228ENST00000459788 SH3RF3Q8TEJ3 882 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-228ENST00000459788 AATFQ9NY61 560 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-228ENST00000459788 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
HDLBP-228ENST00000459788 NAV1Q8NEY1 1877 aa12.19□□□□□ -0.46
HDLBP-228ENST00000459788 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 FLT1P17948 1338 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 DDX60LQ5H9U9 1706 aaKnown RBP12.18□□□□□ -0.46
HDLBP-228ENST00000459788 ASNSP08243 561 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 HOXD10P28358 340 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 GPAT2Q6NUI2 795 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 SIRT2Q8IXJ6 389 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 AS3MTQ9HBK9 375 aa12.18□□□□□ -0.46
HDLBP-228ENST00000459788 PIH1D3Q9NQM4 214 aaKnown RBP12.18□□□□□ -0.46
HDLBP-228ENST00000459788 TLR7Q9NYK1 1049 aaKnown RBP12.18□□□□□ -0.46
HDLBP-228ENST00000459788 USP17L5A8MUK1 530 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 IDH1O75874 414 aaKnown RBP12.17□□□□□ -0.46
HDLBP-228ENST00000459788 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
HDLBP-228ENST00000459788 CAPN2P17655 700 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 CYP7A1P22680 504 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDLBP-228ENST00000459788 SH3D19Q5HYK7 790 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 WDR18Q9BV38 432 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 EHD4Q9H223 541 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 CENPFP49454 3210 aa12.17□□□□□ -0.46
HDLBP-228ENST00000459788 BCRP11274 1271 aa12.16□□□□□ -0.46
HDLBP-228ENST00000459788 TGFBRAP1Q8WUH2 860 aa12.16□□□□□ -0.46
HDLBP-228ENST00000459788 ZSWIM8A7E2V4 1837 aa12.16□□□□□ -0.46
HDLBP-228ENST00000459788 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 ATP5JP18859 108 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 SOX10P56693 466 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 TTC6Q86TZ1 520 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 MAGEB6Q8N7X4 407 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 IL1RAPL2Q9NP60 686 aa12.15□□□□□ -0.46
HDLBP-228ENST00000459788 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-228ENST00000459788 SLC9C1Q4G0N8 1177 aa12.14□□□□□ -0.47
HDLBP-228ENST00000459788 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
HDLBP-228ENST00000459788 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
HDLBP-228ENST00000459788 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-228ENST00000459788 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
HDLBP-228ENST00000459788 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
HDLBP-228ENST00000459788 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
HDLBP-228ENST00000459788 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■□□□□ 8.2
HDLBP-228ENST00000459788 SRRDQ9UH36 339 aa12.14□□□□□ -0.47
HDLBP-228ENST00000459788 TRIM75PA6NK02 468 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-228ENST00000459788 PSMC4P43686 418 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 USP5P45974 858 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 FCGRTP55899 365 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 BACE1P56817 501 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 CAP1Q01518 475 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 SPP2Q13103 211 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 GADL1Q6ZQY3 521 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-228ENST00000459788 HAUS7Q99871 368 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 CRNKL1Q9BZJ0 848 aaKnown RBP12.13□□□□□ -0.47
HDLBP-228ENST00000459788 ANTXR1Q9H6X2 564 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 SERPINB13Q9UIV8 391 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 PALD1Q9ULE6 856 aa12.13□□□□□ -0.47
HDLBP-228ENST00000459788 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
HDLBP-228ENST00000459788 MAGEB6P1A0A0J9YX57 407 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 PDE6AP16499 860 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 OSBPP22059 807 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 DYNLL1P63167 89 aaKnown RBP12.12□□□□□ -0.47
HDLBP-228ENST00000459788 AAMPQ13685 434 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 SMCR8Q8TEV9 937 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-228ENST00000459788 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 DNAJC18Q9H819 358 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
HDLBP-228ENST00000459788 PTCH2Q9Y6C5 1203 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms