RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 GEMIN8Q9NWZ8 242 aaKnown RBP15.58■□□□□ 0.08
TOP3B-213ENST00000457179 COL16A1Q07092 1604 aaPredicted RBP15.58■□□□□ 0.08
TOP3B-213ENST00000457179 UBE2Q2LH0YL09 131 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 UQCRFS1P1P0C7P4 283 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
TOP3B-213ENST00000457179 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 TXNRD3Q86VQ6 643 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 NUP133Q8WUM0 1156 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 AIFM3Q96NN9 605 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 LRRC4BQ9NT99 713 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 MINPP1Q9UNW1 487 aa15.58■□□□□ 0.08
TOP3B-213ENST00000457179 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
TOP3B-213ENST00000457179 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 HMGB1P09429 215 aaKnown RBP15.57■□□□□ 0.08
TOP3B-213ENST00000457179 EVCP57679 992 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 DYNLL1P63167 89 aaKnown RBP15.57■□□□□ 0.08
TOP3B-213ENST00000457179 EXOSC10Q01780 885 aaKnown RBP15.57■□□□□ 0.08
TOP3B-213ENST00000457179 SARM1Q6SZW1 724 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 GOLPH3LQ9H4A5 285 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 YY1AP1Q9H869 796 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 ABCC12Q96J65 1359 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 LTBP4Q8N2S1 1624 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 TBC1D8O95759 1140 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 STX1AQ16623 288 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 CCDC93Q567U6 631 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 RBM43Q6ZSC3 357 aaKnown RBP15.57■□□□□ 0.08
TOP3B-213ENST00000457179 ADGRA1Q86SQ6 560 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 CFAP45Q9UL16 551 aa15.57■□□□□ 0.08
TOP3B-213ENST00000457179 CHRM1P11229 460 aaPredicted RBP15.56■□□□□ 0.08
TOP3B-213ENST00000457179 SFPQP23246 707 aaKnown RBP eCLIP15.56■□□□□ 0.08
TOP3B-213ENST00000457179 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
TOP3B-213ENST00000457179 FBXO18Q8NFZ0 1043 aa15.56■□□□□ 0.08
TOP3B-213ENST00000457179 ATP2B1P20020 1258 aa15.56■□□□□ 0.08
TOP3B-213ENST00000457179 SMARCC2Q8TAQ2 1214 aa15.56■□□□□ 0.08
TOP3B-213ENST00000457179 ADAM21Q9UKJ8 722 aa15.56■□□□□ 0.08
TOP3B-213ENST00000457179 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
TOP3B-213ENST00000457179 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
TOP3B-213ENST00000457179 hCG_1642624A0A1W2PR95 340 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 RPS6KA4O75676 772 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 NFIXQ14938 502 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 SF3A1Q15459 793 aaKnown RBP15.55■□□□□ 0.08
TOP3B-213ENST00000457179 TTC31Q49AM3 519 aaPredicted RBP15.55■□□□□ 0.08
TOP3B-213ENST00000457179 CYB5R4Q7L1T6 521 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 IFNL3Q8IZI9 196 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 GOLGA5Q8TBA6 731 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 STRBPQ96SI9 672 aaKnown RBP15.55■□□□□ 0.08
TOP3B-213ENST00000457179 ZNF219Q9P2Y4 722 aaPredicted RBP15.55■□□□□ 0.08
TOP3B-213ENST00000457179 A0A1B0GVL5 298 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 FGFR2P21802 821 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 GSDMDP57764 484 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 EVX2Q03828 476 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 E2F4Q16254 413 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 SKIDA1Q1XH10 827 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 CCDC73Q6ZRK6 1079 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 REXO1L1PQ8IX06 675 aa15.55■□□□□ 0.08
TOP3B-213ENST00000457179 ZSCAN16Q9H4T2 348 aaPredicted RBP15.55■□□□□ 0.08
TOP3B-213ENST00000457179 IFIT3O14879 490 aaKnown RBP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 LEKR1Q6ZMV7 388 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 DHX40Q8IX18 779 aaKnown RBP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 DOT1LQ8TEK3 1739 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 SLIT2O94813 1529 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 PRDX5P30044 214 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 ANTXR2P58335 489 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 TMEM67Q5HYA8 995 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 ISM2Q6H9L7 571 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 CTR9Q6PD62 1173 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 FOXR1Q6PIV2 292 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 PACS2Q86VP3 889 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 CERKQ8TCT0 537 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 EPB41L4AQ9HCS5 686 aaPredicted RBP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 NEDD4P46934 1319 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 ARMCX5Q6P1M9 558 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 CC2D1AQ6P1N0 951 aaPredicted RBP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 GNL3LQ9NVN8 582 aaKnown RBP15.54■□□□□ 0.08
TOP3B-213ENST00000457179 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
TOP3B-213ENST00000457179 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 NBPF11Q86T75 865 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 C8orf76Q96K31 380 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 UBR2Q8IWV8 1755 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 CARMIL3Q8ND23 1372 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 BIN1O00499 593 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 KINO60870 393 aaKnown RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 TADA3O75528 432 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 ETF1P62495 437 aaKnown RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 MYCBPQ99417 103 aaPredicted RBP15.53■□□□□ 0.08
TOP3B-213ENST00000457179 IFNKQ9P0W0 207 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 VPS18Q9P253 973 aa15.53■□□□□ 0.08
TOP3B-213ENST00000457179 NRDCO43847 1150 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms