RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 AEBP1Q8IUX7 1158 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 FAM43AQ8N2R8 423 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 FBXL18Q96ME1 805 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 HEG1Q9ULI3 1381 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 ABCC4O15439 1325 aa7.27□□□□□ -1.24
SBDSP1-204ENST00000453858 ZNF318Q5VUA4 2279 aa7.27□□□□□ -1.24
SBDSP1-204ENST00000453858 GTF2E1P29083 439 aaPredicted RBP7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 NF2P35240 595 aa7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 ABL2P42684 1182 aa7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 PIP4K2AP48426 406 aaPredicted RBP7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 UBXN2AP68543 259 aa7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 TAF1CQ15572 869 aaPredicted RBP7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 C17orf99Q6UX52 265 aa7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 AGBL3Q8NEM8 1001 aa7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 MAP10Q9P2G4 905 aa7.27□□□□□ -1.25
SBDSP1-204ENST00000453858 USP24Q9UPU5 2620 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 PI4K2BG5E9Z4 385 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 ECE2O60344 883 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 PSMC4P43686 418 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 TNNT2P45379 298 aaPredicted RBP7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 MCCD1P59942 119 aaPredicted RBP7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 PTK2Q05397 1052 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 SHHQ15465 462 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 SLC10A5Q5PT55 438 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 AKNAD1Q5T1N1 836 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 NBPF10Q6P3W6 841 aaKnown RBP7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 RAET1EQ8TD07 263 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 EPS8L1Q8TE68 723 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 POM121Q96HA1 1249 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 NYXQ9GZU5 481 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 POLLQ9UGP5 575 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 USP16Q9Y5T5 823 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 GVINP1Q7Z2Y8 2422 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 ADGRA2Q96PE1 1338 aa7.26□□□□□ -1.25
SBDSP1-204ENST00000453858 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 WNT10BO00744 389 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 CD2BP2O95400 341 aaKnown RBP7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 SOX11P35716 441 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 KIF22Q14807 665 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 C9orf50Q5SZB4 431 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 ZNF790Q6PG37 636 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 CARD14Q9BXL6 1004 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 TMX4Q9H1E5 349 aaPredicted RBP7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 KCNH6Q9H252 994 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 GCN1Q92616 2671 aaKnown RBP7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 PFASO15067 1338 aa7.25□□□□□ -1.25
SBDSP1-204ENST00000453858 FRYQ5TBA9 3013 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 ZBBXA8MT70 800 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 USP2O75604 605 aaPredicted RBP7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 COL6A1P12109 1028 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 PRKCZQ05513 592 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 NR1H3Q13133 447 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 SUSD4Q5VX71 490 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 ERMP1Q7Z2K6 904 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 BIN2Q9UBW5 565 aaPredicted RBP7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 FAM186AA6NE01 2351 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 UBN2Q6ZU65 1347 aa7.24□□□□□ -1.25
SBDSP1-204ENST00000453858 INHAP05111 366 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 ITGB8P26012 769 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 HOXD10P28358 340 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 WNT7BP56706 349 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 IRF5Q13568 498 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 KCTD2Q14681 263 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 BPHLQ86WA6 291 aaPredicted RBP7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 ZBED3Q96IU2 234 aaPredicted RBP7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 TESK2Q96S53 571 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 GABRQQ9UN88 632 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 MYPNQ86TC9 1320 aa7.23□□□□□ -1.25
SBDSP1-204ENST00000453858 ROCK2O75116 1388 aaKnown RBP7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 IBTKQ9P2D0 1353 aaPredicted RBP7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 NAV2Q8IVL1 2488 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 SPEGQ15772 3267 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 CCL15-CCL14A0A0B4J2E2 113 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 NTSR2O95665 410 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 EIF4G2P78344 907 aaKnown RBP eCLIP7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 ADGRE1Q14246 886 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 CCL15Q16663 113 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 LRRC26Q2I0M4 334 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 PPM1EQ8WY54 764 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 L3MBTL2Q969R5 705 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 NLRP3Q96P20 1036 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 C11orf49Q9H6J7 331 aa7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 ZCCHC17Q9NP64 241 aaKnown RBP7.22□□□□□ -1.25
SBDSP1-204ENST00000453858 MAP1BP46821 2468 aaKnown RBP7.21□□□□□ -1.25
SBDSP1-204ENST00000453858 ZFYVE26Q68DK2 2539 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 KCNQ3O43525 872 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 ADCY3O60266 1144 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 ELNP15502 786 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 KCNQ1P51787 676 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 TFF2Q03403 129 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 PDE3AQ14432 1141 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 ZNF34Q8IZ26 560 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 ZNF511Q8NB15 262 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 OPTNQ96CV9 577 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 DEFB129Q9H1M3 183 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms