RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KIF3CO14782 793 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 SEMA3FQ13275 785 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 CPLX2Q6PUV4 134 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 MIEF2Q96C03 454 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 GNL3LQ9NVN8 582 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 BCL9LQ86UU0 1499 aa15.35■□□□□ 0.05
SYNGAP1-204ENST00000449372 DDB1Q16531 1140 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 SYNE3Q6ZMZ3 975 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 PGBD1Q96JS3 809 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 A0A087WWV3 80 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 MCMDC2Q4G0Z9 681 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 VGLL2Q8N8G2 317 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 TACO1Q9BSH4 297 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 H0YHG0 523 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 MAP3K9P80192 1104 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 SARNPP82979 210 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 ISM2Q6H9L7 571 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
SYNGAP1-204ENST00000449372 MYO1BO43795 1136 aa15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 NEBLO76041 1014 aa15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 STK38Q15208 465 aa15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 KCNG4Q8TDN1 519 aa15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 FBXW7Q969H0 707 aa15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 SEC62Q99442 399 aaKnown RBP15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 MPHOSPH8Q99549 860 aa15.33■□□□□ 0.05
SYNGAP1-204ENST00000449372 A0A1B0GUL6 1792 aa15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 C21orf2O43822 256 aa15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 SH3BP1Q9Y3L3 701 aa15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 BEND6Q5SZJ8 279 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 XPO4Q9C0E2 1151 aaKnown RBP15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 RCOR1Q9UKL0 485 aa15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
SYNGAP1-204ENST00000449372 GOLGA6L9A6NEM1 432 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 DHX32Q7L7V1 743 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 FAM204AQ9H8W3 233 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 KAT6BQ8WYB5 2073 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 ABCC12Q96J65 1359 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 ITPK1Q13572 414 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 CCDC57Q2TAC2 916 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 FAM71BQ8TC56 605 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 MYO5AQ9Y4I1 1855 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 CTSWP56202 376 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 RESTQ13127 1097 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
SYNGAP1-204ENST00000449372 COL4A1P02462 1669 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 NEDD9Q14511 834 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZMYM1Q5SVZ6 1142 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 Q6ZUG5 572 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 CALR3Q96L12 384 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 GREM2Q9H772 168 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 PFKFB2O60825 505 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 ELF1P32519 619 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 SSR1P43307 286 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 GNG11P61952 73 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 SCRN1Q12765 414 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 C11orf91Q3C1V1 193 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 WWC2Q6AWC2 1192 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 FAXDC2Q96IV6 333 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZNF330Q9Y3S2 320 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 ERLIN1O75477 346 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 NAIF1Q69YI7 327 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 CCDC129Q6ZRS4 1044 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 DZIP3Q86Y13 1208 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 SLC24A3Q9HC58 644 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 HELLSQ9NRZ9 838 aa15.31■□□□□ 0.04
SYNGAP1-204ENST00000449372 CPLX1O14810 134 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 GPTP24298 496 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 ADORA1P30542 326 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 TOB2Q14106 344 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZSCAN12O43309 604 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 NEUROD6Q96NK8 337 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 TTC19Q6DKK2 380 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 ACBD3Q9H3P7 528 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
SYNGAP1-204ENST00000449372 A0A1W2PQ27 194 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 A0A1W2PQ64 194 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 A0A1W2PQD8 194 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 CLSTN1O94985 981 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 CRKLP46109 303 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 IFIT5Q13325 482 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 BRAPQ7Z569 592 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms