RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 AGTPBP1Q9UPW5 1226 aa25.44■■□□□ 1.66
CPNE1-219ENST00000440240 NOP58Q9Y2X3 529 aaKnown RBP25.44■■□□□ 1.66
CPNE1-219ENST00000440240 ZSWIM8A7E2V4 1837 aa25.43■■□□□ 1.66
CPNE1-219ENST00000440240 FAM196BA6NMK8 535 aa25.43■■□□□ 1.66
CPNE1-219ENST00000440240 CAP2P40123 477 aa25.43■■□□□ 1.66
CPNE1-219ENST00000440240 PPP4CP60510 307 aa25.43■■□□□ 1.66
CPNE1-219ENST00000440240 ITPRIPQ8IWB1 547 aa25.43■■□□□ 1.66
CPNE1-219ENST00000440240 NKX2-3Q8TAU0 364 aa25.43■■□□□ 1.66
CPNE1-219ENST00000440240 SH3RF3Q8TEJ3 882 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-219ENST00000440240 BIN2Q9UBW5 565 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-219ENST00000440240 PRKCZQ05513 592 aa25.42■■□□□ 1.66
CPNE1-219ENST00000440240 SPP2Q13103 211 aa25.42■■□□□ 1.66
CPNE1-219ENST00000440240 MTFR1Q15390 333 aa25.42■■□□□ 1.66
CPNE1-219ENST00000440240 PROCA1Q8NCQ7 364 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-219ENST00000440240 ZNF280CQ8ND82 737 aa25.42■■□□□ 1.66
CPNE1-219ENST00000440240 C1orf115Q9H7X2 142 aa25.42■■□□□ 1.66
CPNE1-219ENST00000440240 AATFQ9NY61 560 aaKnown RBP eCLIP25.42■■□□□ 1.66
CPNE1-219ENST00000440240 PNMA3Q9UL41 463 aa25.42■■□□□ 1.66
CPNE1-219ENST00000440240 CYP2E1P05181 493 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-219ENST00000440240 UBXN2AP68543 259 aa25.41■■□□□ 1.66
CPNE1-219ENST00000440240 CCDC84Q86UT8 332 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-219ENST00000440240 MIER1Q8N108 512 aa25.41■■□□□ 1.66
CPNE1-219ENST00000440240 SLAIN1Q8ND83 568 aa25.41■■□□□ 1.66
CPNE1-219ENST00000440240 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-219ENST00000440240 FOXP4Q8IVH2 680 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-219ENST00000440240 DOCK1Q14185 1865 aa25.39■■□□□ 1.66
CPNE1-219ENST00000440240 USP17L5A8MUK1 530 aa25.39■■□□□ 1.66
CPNE1-219ENST00000440240 TNPO2O14787 897 aaKnown RBP25.39■■□□□ 1.66
CPNE1-219ENST00000440240 GJB1P08034 283 aa25.39■■□□□ 1.66
CPNE1-219ENST00000440240 PABPC4Q13310 644 aaKnown RBP eCLIP25.39■■□□□ 1.66
CPNE1-219ENST00000440240 TGFBRAP1Q8WUH2 860 aa25.39■■□□□ 1.66
CPNE1-219ENST00000440240 AS3MTQ9HBK9 375 aa25.39■■□□□ 1.66
CPNE1-219ENST00000440240 RLBP1P12271 317 aa25.38■■□□□ 1.65
CPNE1-219ENST00000440240 CCL5P13501 91 aa25.38■■□□□ 1.65
CPNE1-219ENST00000440240 ZAP70P43403 619 aa25.38■■□□□ 1.65
CPNE1-219ENST00000440240 TREML2Q5T2D2 321 aa25.38■■□□□ 1.65
CPNE1-219ENST00000440240 RNF208Q9H0X6 261 aa25.38■■□□□ 1.65
CPNE1-219ENST00000440240 GABRQQ9UN88 632 aa25.38■■□□□ 1.65
CPNE1-219ENST00000440240 ADCY3O60266 1144 aa25.37■■□□□ 1.65
CPNE1-219ENST00000440240 GJA8P48165 433 aa25.37■■□□□ 1.65
CPNE1-219ENST00000440240 GCLCP48506 637 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-219ENST00000440240 FLT3LGP49771 235 aa25.37■■□□□ 1.65
CPNE1-219ENST00000440240 HABP4Q5JVS0 413 aaKnown RBP25.37■■□□□ 1.65
CPNE1-219ENST00000440240 ANKRD13CQ8N6S4 541 aa25.37■■□□□ 1.65
CPNE1-219ENST00000440240 DBNLQ9UJU6 430 aaKnown RBP25.37■■□□□ 1.65
CPNE1-219ENST00000440240 ASNSP08243 561 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 HMGCS2P54868 508 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 IRF5Q13568 498 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 RRP1BQ14684 758 aaKnown RBP25.36■■□□□ 1.65
CPNE1-219ENST00000440240 FAM110CQ1W6H9 321 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 SH3D19Q5HYK7 790 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 MAPKAPK5Q8IW41 473 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 PXYLP1Q8TE99 480 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 COA7Q96BR5 231 aa25.36■■□□□ 1.65
CPNE1-219ENST00000440240 EAF2Q96CJ1 260 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-219ENST00000440240 CCDC8Q9H0W5 538 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-219ENST00000440240 PHIPQ8WWQ0 1821 aa25.35■■□□□ 1.65
CPNE1-219ENST00000440240 CEP290O15078 2479 aa25.35■■□□□ 1.65
CPNE1-219ENST00000440240 DIEXFQ68CQ4 756 aaKnown RBP25.35■■□□□ 1.65
CPNE1-219ENST00000440240 ADGRA1Q86SQ6 560 aa25.35■■□□□ 1.65
CPNE1-219ENST00000440240 METTL16Q86W50 562 aaKnown RBP25.35■■□□□ 1.65
CPNE1-219ENST00000440240 WDR18Q9BV38 432 aa25.35■■□□□ 1.65
CPNE1-219ENST00000440240 TRIM34Q9BYJ4 488 aa25.35■■□□□ 1.65
CPNE1-219ENST00000440240 GINM1Q9NU53 330 aa25.35■■□□□ 1.65
CPNE1-219ENST00000440240 PTPRFP10586 1907 aa25.34■■□□□ 1.65
CPNE1-219ENST00000440240 CERS3Q8IU89 383 aa25.34■■□□□ 1.65
CPNE1-219ENST00000440240 ERC1Q8IUD2 1116 aa25.34■■□□□ 1.65
CPNE1-219ENST00000440240 CRACR2BQ8N4Y2 399 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-219ENST00000440240 SHISA4Q96DD7 197 aa25.34■■□□□ 1.65
CPNE1-219ENST00000440240 PIH1D3Q9NQM4 214 aaKnown RBP25.34■■□□□ 1.65
CPNE1-219ENST00000440240 FLT1P17948 1338 aa25.34■■□□□ 1.65
CPNE1-219ENST00000440240 CAPN2P17655 700 aa25.33■■□□□ 1.65
CPNE1-219ENST00000440240 CYP7A1P22680 504 aa25.33■■□□□ 1.65
CPNE1-219ENST00000440240 CEP85Q6P2H3 762 aa25.33■■□□□ 1.65
CPNE1-219ENST00000440240 TMED8Q6PL24 325 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-219ENST00000440240 TLR7Q9NYK1 1049 aaKnown RBP25.33■■□□□ 1.65
CPNE1-219ENST00000440240 PALD1Q9ULE6 856 aa25.33■■□□□ 1.65
CPNE1-219ENST00000440240 IDH1O75874 414 aaKnown RBP25.32■■□□□ 1.64
CPNE1-219ENST00000440240 BACE1P56817 501 aa25.32■■□□□ 1.64
CPNE1-219ENST00000440240 ASCC2Q9H1I8 757 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-219ENST00000440240 TMOD4Q9NZQ9 345 aa25.32■■□□□ 1.64
CPNE1-219ENST00000440240 C19orf81C9J6K1 198 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 HLA-DOAP06340 250 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 MS4A1P11836 297 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 HSP90AB4PQ58FF6 505 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 U2AF1L4Q8WU68 220 aaKnown RBP25.31■■□□□ 1.64
CPNE1-219ENST00000440240 UNC93B1Q9H1C4 597 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 MGAMO43451 1857 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 ZBED9Q6R2W3 1325 aa25.31■■□□□ 1.64
CPNE1-219ENST00000440240 SGPL1O95470 568 aa25.3■■□□□ 1.64
CPNE1-219ENST00000440240 ELNP15502 786 aa25.3■■□□□ 1.64
CPNE1-219ENST00000440240 DPF3Q92784 378 aa25.3■■□□□ 1.64
CPNE1-219ENST00000440240 HTATIP2Q9BUP3 242 aa25.3■■□□□ 1.64
CPNE1-219ENST00000440240 INHAP05111 366 aa25.29■■□□□ 1.64
CPNE1-219ENST00000440240 HOXA7P31268 230 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-219ENST00000440240 DYNLL1P63167 89 aaKnown RBP25.29■■□□□ 1.64
CPNE1-219ENST00000440240 MAP3K12Q12852 859 aa25.29■■□□□ 1.64
CPNE1-219ENST00000440240 MTMR2Q13614 643 aa25.29■■□□□ 1.64
CPNE1-219ENST00000440240 UBE2Q1Q7Z7E8 422 aa25.29■■□□□ 1.64
CPNE1-219ENST00000440240 DNAJC18Q9H819 358 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms