RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
APP-208ENST00000439274 LIFRP42702 1097 aa17.67■□□□□ 0.42
APP-208ENST00000439274 MDM2Q00987 491 aaPredicted RBP17.67■□□□□ 0.42
APP-208ENST00000439274 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
APP-208ENST00000439274 TRIM65Q6PJ69 517 aa17.67■□□□□ 0.42
APP-208ENST00000439274 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
APP-208ENST00000439274 ST7Q9NRC1 585 aa17.67■□□□□ 0.42
APP-208ENST00000439274 PDE8AO60658 829 aa17.66■□□□□ 0.42
APP-208ENST00000439274 ATP2B1P20020 1258 aa17.66■□□□□ 0.42
APP-208ENST00000439274 FMR1Q06787 632 aaKnown RBP eCLIP17.66■□□□□ 0.42
APP-208ENST00000439274 NR5A1Q13285 461 aa17.66■□□□□ 0.42
APP-208ENST00000439274 ZNF771Q7L3S4 317 aaPredicted RBP17.66■□□□□ 0.42
APP-208ENST00000439274 REXO1L1PQ8IX06 675 aa17.66■□□□□ 0.42
APP-208ENST00000439274 LPIN2Q92539 896 aa17.66■□□□□ 0.42
APP-208ENST00000439274 MAN1B1Q9UKM7 699 aa17.66■□□□□ 0.42
APP-208ENST00000439274 GSG1L2A8MUP6 293 aa17.66■□□□□ 0.42
APP-208ENST00000439274 MMP1P03956 469 aa17.66■□□□□ 0.42
APP-208ENST00000439274 FGFR2P21802 821 aa17.66■□□□□ 0.42
APP-208ENST00000439274 ALX1Q15699 326 aa17.66■□□□□ 0.42
APP-208ENST00000439274 TRMT44Q8IYL2 757 aaKnown RBP17.66■□□□□ 0.42
APP-208ENST00000439274 FAM177A1Q8N128 213 aaPredicted RBP17.66■□□□□ 0.42
APP-208ENST00000439274 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.66■□□□□ 0.42
APP-208ENST00000439274 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
APP-208ENST00000439274 POLR2DO15514 142 aaKnown RBP17.65■□□□□ 0.42
APP-208ENST00000439274 CYP19A1P11511 503 aaPredicted RBP17.65■□□□□ 0.42
APP-208ENST00000439274 IFNAR1P17181 557 aa17.65■□□□□ 0.42
APP-208ENST00000439274 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
APP-208ENST00000439274 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
APP-208ENST00000439274 TMEM139Q8IV31 216 aa17.65■□□□□ 0.42
APP-208ENST00000439274 LCORLQ8N3X6 602 aa17.65■□□□□ 0.42
APP-208ENST00000439274 SERTAD1Q9UHV2 236 aa17.65■□□□□ 0.42
APP-208ENST00000439274 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
APP-208ENST00000439274 STK36Q9NRP7 1315 aa17.65■□□□□ 0.42
APP-208ENST00000439274 KAT6BQ8WYB5 2073 aa17.65■□□□□ 0.42
APP-208ENST00000439274 KIF20AO95235 890 aa17.65■□□□□ 0.42
APP-208ENST00000439274 H2AFXP16104 143 aaPredicted RBP17.65■□□□□ 0.42
APP-208ENST00000439274 ARHGAP29Q52LW3 1261 aa17.65■□□□□ 0.42
APP-208ENST00000439274 MFSD6Q6ZSS7 791 aa17.65■□□□□ 0.42
APP-208ENST00000439274 PDILTQ8N807 584 aa17.65■□□□□ 0.42
APP-208ENST00000439274 FAM53CQ9NYF3 392 aa17.65■□□□□ 0.42
APP-208ENST00000439274 PCDHB6Q9Y5E3 794 aa17.65■□□□□ 0.42
APP-208ENST00000439274 MYH3P11055 1940 aa17.65■□□□□ 0.42
APP-208ENST00000439274 SLFN14P0C7P3 912 aa17.64■□□□□ 0.41
APP-208ENST00000439274 PIP4K2BP78356 416 aa17.64■□□□□ 0.41
APP-208ENST00000439274 GABPB1Q06547 395 aaPredicted RBP17.64■□□□□ 0.41
APP-208ENST00000439274 MAP3K12Q12852 859 aa17.64■□□□□ 0.41
APP-208ENST00000439274 POSTNQ15063 836 aa17.64■□□□□ 0.41
APP-208ENST00000439274 RTN1Q16799 776 aa17.64■□□□□ 0.41
APP-208ENST00000439274 OXER1Q8TDS5 423 aa17.64■□□□□ 0.41
APP-208ENST00000439274 LRP6O75581 1613 aa17.64■□□□□ 0.41
APP-208ENST00000439274 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
APP-208ENST00000439274 TDO2P48775 406 aa17.64■□□□□ 0.41
APP-208ENST00000439274 SAFBQ15424 915 aaKnown RBP eCLIP17.64■□□□□ 0.41
APP-208ENST00000439274 USP49Q70CQ1 688 aa17.64■□□□□ 0.41
APP-208ENST00000439274 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
APP-208ENST00000439274 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
APP-208ENST00000439274 URI1O94763 535 aaPredicted RBP17.63■□□□□ 0.41
APP-208ENST00000439274 CLCN6P51797 869 aa17.63■□□□□ 0.41
APP-208ENST00000439274 NUP133Q8WUM0 1156 aa17.63■□□□□ 0.41
APP-208ENST00000439274 NFE2L3Q9Y4A8 694 aa17.63■□□□□ 0.41
APP-208ENST00000439274 SLC4A4Q9Y6R1 1079 aa17.63■□□□□ 0.41
APP-208ENST00000439274 VWA3AA6NCI4 1184 aa17.63■□□□□ 0.41
APP-208ENST00000439274 PTPREP23469 700 aa17.63■□□□□ 0.41
APP-208ENST00000439274 ADKP55263 362 aaKnown RBP17.63■□□□□ 0.41
APP-208ENST00000439274 WTAPQ15007 396 aa17.63■□□□□ 0.41
APP-208ENST00000439274 SMIM22K7EJ46 135 aa17.62■□□□□ 0.41
APP-208ENST00000439274 CCP110O43303 1012 aa17.62■□□□□ 0.41
APP-208ENST00000439274 SLC5A1P13866 664 aa17.62■□□□□ 0.41
APP-208ENST00000439274 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
APP-208ENST00000439274 TRIM22Q8IYM9 498 aa17.62■□□□□ 0.41
APP-208ENST00000439274 WASF1Q92558 559 aa17.62■□□□□ 0.41
APP-208ENST00000439274 MED15Q96RN5 788 aa17.62■□□□□ 0.41
APP-208ENST00000439274 KRT23Q9C075 422 aa17.62■□□□□ 0.41
APP-208ENST00000439274 CNNM2Q9H8M5 875 aa17.62■□□□□ 0.41
APP-208ENST00000439274 PPP2R2CQ9Y2T4 447 aa17.62■□□□□ 0.41
APP-208ENST00000439274 CHD4Q14839 1912 aa17.62■□□□□ 0.41
APP-208ENST00000439274 MROH5Q6ZUA9 1318 aa17.62■□□□□ 0.41
APP-208ENST00000439274 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
APP-208ENST00000439274 BCAMP50895 628 aa17.62■□□□□ 0.41
APP-208ENST00000439274 SLIT2O94813 1529 aa17.61■□□□□ 0.41
APP-208ENST00000439274 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
APP-208ENST00000439274 TBX2Q13207 712 aaPredicted RBP17.61■□□□□ 0.41
APP-208ENST00000439274 TOGARAM2Q6ZUX3 1019 aa17.61■□□□□ 0.41
APP-208ENST00000439274 CRACR2BQ8N4Y2 399 aaPredicted RBP17.61■□□□□ 0.41
APP-208ENST00000439274 CARD6Q9BX69 1037 aa17.61■□□□□ 0.41
APP-208ENST00000439274 SAMSN1Q9NSI8 373 aaKnown RBP17.61■□□□□ 0.41
APP-208ENST00000439274 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
APP-208ENST00000439274 TUBB4AP04350 444 aa17.61■□□□□ 0.41
APP-208ENST00000439274 TERF2Q15554 542 aa17.61■□□□□ 0.41
APP-208ENST00000439274 SMARCE1Q969G3 411 aa17.61■□□□□ 0.41
APP-208ENST00000439274 BAG1Q99933 345 aaPredicted RBP17.61■□□□□ 0.41
APP-208ENST00000439274 CABP5Q9NP86 173 aa17.61■□□□□ 0.41
APP-208ENST00000439274 ARHGAP6O43182 974 aa17.6■□□□□ 0.41
APP-208ENST00000439274 ZNF18P17022 549 aa17.6■□□□□ 0.41
APP-208ENST00000439274 MORC3Q14149 939 aa17.6■□□□□ 0.41
APP-208ENST00000439274 RILPL1Q5EBL4 403 aa17.6■□□□□ 0.41
APP-208ENST00000439274 TC2NQ8N9U0 490 aa17.6■□□□□ 0.41
APP-208ENST00000439274 STAG1Q8WVM7 1258 aa17.6■□□□□ 0.41
APP-208ENST00000439274 SHISA4Q96DD7 197 aa17.6■□□□□ 0.41
APP-208ENST00000439274 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms