RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 TNPO2O14787 897 aaKnown RBP18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 BAG3O95817 575 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 CAP2P40123 477 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 ATP8B2P98198 1209 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 SPP2Q13103 211 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 ZNF280CQ8ND82 737 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 SSH3Q8TE77 659 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 SH3RF3Q8TEJ3 882 aaPredicted RBP18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 RNF208Q9H0X6 261 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 PNMA3Q9UL41 463 aa18.59■□□□□ 0.57
CSNK1E-208ENST00000431611 SURF6O75683 361 aaKnown RBP18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 GJA8P48165 433 aa18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 FLT3LGP49771 235 aa18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 TREML2Q5T2D2 321 aa18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 PROCA1Q8NCQ7 364 aaPredicted RBP18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 TBC1D2Q9BYX2 928 aa18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 AATFQ9NY61 560 aaKnown RBP eCLIP18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 HERC5Q9UII4 1024 aaKnown RBP18.58■□□□□ 0.56
CSNK1E-208ENST00000431611 ADCY3O60266 1144 aa18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 PLCG2P16885 1265 aa18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 RRP1BQ14684 758 aaKnown RBP18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 ANKRD13CQ8N6S4 541 aa18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 DHX36Q9H2U1 1008 aaKnown RBP18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 C1orf115Q9H7X2 142 aa18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 PI4KBQ9UBF8 816 aa18.57■□□□□ 0.56
CSNK1E-208ENST00000431611 USP17L5A8MUK1 530 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 H0YGN5 161 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 CYP2E1P05181 493 aaPredicted RBP18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 PPP4CP60510 307 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 PABPC4Q13310 644 aaKnown RBP eCLIP18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 PXYLP1Q8TE99 480 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 COA7Q96BR5 231 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 ZNF512BQ96KM6 892 aaPredicted RBP18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 AS3MTQ9HBK9 375 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 COLQQ9Y215 455 aaPredicted RBP18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 DOCK1Q14185 1865 aa18.56■□□□□ 0.56
CSNK1E-208ENST00000431611 ELNP15502 786 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 HMGCS2P54868 508 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 IRF5Q13568 498 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 FAM110CQ1W6H9 321 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 MAPKAPK5Q8IW41 473 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 U2AF1L4Q8WU68 220 aaKnown RBP18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 TGFBRAP1Q8WUH2 860 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 DPF3Q92784 378 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 UNC93B1Q9H1C4 597 aa18.55■□□□□ 0.56
CSNK1E-208ENST00000431611 IGSF3O75054 1194 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 INHAP05111 366 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 ZAP70P43403 619 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 GCLCP48506 637 aaPredicted RBP18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 SH3D19Q5HYK7 790 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 ADGRA1Q86SQ6 560 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
CSNK1E-208ENST00000431611 ZBTB7BO15156 539 aaPredicted RBP18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 SGPL1O95470 568 aa18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 UBE2Q1Q7Z7E8 422 aa18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 FOXP4Q8IVH2 680 aaPredicted RBP18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 HTATIP2Q9BUP3 242 aa18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
CSNK1E-208ENST00000431611 FLT1P17948 1338 aa18.52■□□□□ 0.56
CSNK1E-208ENST00000431611 ASNSP08243 561 aa18.52■□□□□ 0.56
CSNK1E-208ENST00000431611 CRACR2BQ8N4Y2 399 aaPredicted RBP18.52■□□□□ 0.56
CSNK1E-208ENST00000431611 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
CSNK1E-208ENST00000431611 ASCC2Q9H1I8 757 aaPredicted RBP18.52■□□□□ 0.56
CSNK1E-208ENST00000431611 PIH1D3Q9NQM4 214 aaKnown RBP18.52■□□□□ 0.56
CSNK1E-208ENST00000431611 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 RLBP1P12271 317 aa18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 FXR1P51114 621 aaKnown RBP eCLIP18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 MTMR2Q13614 643 aa18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 EAF2Q96CJ1 260 aaPredicted RBP18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 TLR7Q9NYK1 1049 aaKnown RBP18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 TMOD4Q9NZQ9 345 aa18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
CSNK1E-208ENST00000431611 CAPN2P17655 700 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 CYP7A1P22680 504 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 BACE1P56817 501 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 JAG1P78504 1218 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 GINM1Q9NU53 330 aa18.5■□□□□ 0.55
CSNK1E-208ENST00000431611 PTPRFP10586 1907 aa18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 IDH1O75874 414 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 TFRCP02786 760 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 HLA-DOAP06340 250 aa18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 IRX3P78415 501 aaPredicted RBP18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 CHRDL2Q6WN34 429 aa18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 SAP30BPQ9UHR5 308 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-208ENST00000431611 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 GDF11O95390 407 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 HOXA7P31268 230 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms