RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PRKCZQ05513 592 aa19.84■□□□□ 0.77
COL18A1-205ENST00000423214 MTFR1Q15390 333 aa19.84■□□□□ 0.77
COL18A1-205ENST00000423214 CCDC84Q86UT8 332 aaPredicted RBP19.84■□□□□ 0.77
COL18A1-205ENST00000423214 PNMA3Q9UL41 463 aa19.84■□□□□ 0.77
COL18A1-205ENST00000423214 AGTPBP1Q9UPW5 1226 aa19.84■□□□□ 0.77
COL18A1-205ENST00000423214 CCDC158Q5M9N0 1113 aa19.83■□□□□ 0.77
COL18A1-205ENST00000423214 SLAIN1Q8ND83 568 aa19.83■□□□□ 0.77
COL18A1-205ENST00000423214 NKX2-3Q8TAU0 364 aa19.83■□□□□ 0.77
COL18A1-205ENST00000423214 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL18A1-205ENST00000423214 TNNI3KQ59H18 835 aa19.82■□□□□ 0.76
COL18A1-205ENST00000423214 HABP4Q5JVS0 413 aaKnown RBP19.82■□□□□ 0.76
COL18A1-205ENST00000423214 NAA16Q6N069 864 aaPredicted RBP19.82■□□□□ 0.76
COL18A1-205ENST00000423214 TBC1D2Q9BYX2 928 aa19.82■□□□□ 0.76
COL18A1-205ENST00000423214 GPR108Q9NPR9 543 aa19.82■□□□□ 0.76
COL18A1-205ENST00000423214 FPGT-TNNI3KV9GXZ4 949 aa19.82■□□□□ 0.76
COL18A1-205ENST00000423214 NAV1Q8NEY1 1877 aa19.82■□□□□ 0.76
COL18A1-205ENST00000423214 MYH8P13535 1937 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 TNPO2O14787 897 aaKnown RBP19.81■□□□□ 0.76
COL18A1-205ENST00000423214 BAG3O95817 575 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 CCL5P13501 91 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 PLCG2P16885 1265 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 PROCA1Q8NCQ7 364 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-205ENST00000423214 SH3RF3Q8TEJ3 882 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-205ENST00000423214 C1orf115Q9H7X2 142 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 SNRKQ9NRH2 765 aa19.81■□□□□ 0.76
COL18A1-205ENST00000423214 POLA2Q14181 598 aa19.8■□□□□ 0.76
COL18A1-205ENST00000423214 SHISA4Q96DD7 197 aa19.8■□□□□ 0.76
COL18A1-205ENST00000423214 DBNDD2Q9BQY9 259 aa19.8■□□□□ 0.76
COL18A1-205ENST00000423214 TRIM34Q9BYJ4 488 aa19.8■□□□□ 0.76
COL18A1-205ENST00000423214 RNF208Q9H0X6 261 aa19.8■□□□□ 0.76
COL18A1-205ENST00000423214 AATFQ9NY61 560 aaKnown RBP eCLIP19.8■□□□□ 0.76
COL18A1-205ENST00000423214 HERC5Q9UII4 1024 aaKnown RBP19.8■□□□□ 0.76
COL18A1-205ENST00000423214 GABRQQ9UN88 632 aa19.8■□□□□ 0.76
COL18A1-205ENST00000423214 ADCY3O60266 1144 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 SURF6O75683 361 aaKnown RBP19.79■□□□□ 0.76
COL18A1-205ENST00000423214 PABPC4Q13310 644 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL18A1-205ENST00000423214 TREML2Q5T2D2 321 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 ANKRD13CQ8N6S4 541 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 ZNF280CQ8ND82 737 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 SSH3Q8TE77 659 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 AS3MTQ9HBK9 375 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 PLXNB2O15031 1838 aa19.79■□□□□ 0.76
COL18A1-205ENST00000423214 USP17L5A8MUK1 530 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 GJB1P08034 283 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 CAP2P40123 477 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 GJA8P48165 433 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 HMGCS2P54868 508 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 ATP8B2P98198 1209 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 SPP2Q13103 211 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 FAM110CQ1W6H9 321 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 COA7Q96BR5 231 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 DHX36Q9H2U1 1008 aaKnown RBP19.78■□□□□ 0.76
COL18A1-205ENST00000423214 PI4KBQ9UBF8 816 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 TAOK2Q9UL54 1235 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 TRIOBPQ9H2D6 2365 aa19.78■□□□□ 0.76
COL18A1-205ENST00000423214 ALPK3Q96L96 1907 aa19.77■□□□□ 0.76
COL18A1-205ENST00000423214 FLT3LGP49771 235 aa19.77■□□□□ 0.76
COL18A1-205ENST00000423214 MAPKAPK5Q8IW41 473 aa19.77■□□□□ 0.76
COL18A1-205ENST00000423214 CRACR2BQ8N4Y2 399 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-205ENST00000423214 FLT1P17948 1338 aa19.76■□□□□ 0.75
COL18A1-205ENST00000423214 DDX60LQ5H9U9 1706 aaKnown RBP19.76■□□□□ 0.75
COL18A1-205ENST00000423214 ELNP15502 786 aa19.76■□□□□ 0.75
COL18A1-205ENST00000423214 TGFBRAP1Q8WUH2 860 aa19.76■□□□□ 0.75
COL18A1-205ENST00000423214 HTATIP2Q9BUP3 242 aa19.76■□□□□ 0.75
COL18A1-205ENST00000423214 INHAP05111 366 aa19.75■□□□□ 0.75
COL18A1-205ENST00000423214 CYP2E1P05181 493 aaPredicted RBP19.75■□□□□ 0.75
COL18A1-205ENST00000423214 ZAP70P43403 619 aa19.75■□□□□ 0.75
COL18A1-205ENST00000423214 GCLCP48506 637 aaPredicted RBP19.75■□□□□ 0.75
COL18A1-205ENST00000423214 IRF5Q13568 498 aa19.75■□□□□ 0.75
COL18A1-205ENST00000423214 DPF3Q92784 378 aa19.75■□□□□ 0.75
COL18A1-205ENST00000423214 ZNF512BQ96KM6 892 aaPredicted RBP19.75■□□□□ 0.75
COL18A1-205ENST00000423214 UNC93B1Q9H1C4 597 aa19.75■□□□□ 0.75
COL18A1-205ENST00000423214 MYH7P12883 1935 aa19.74■□□□□ 0.75
COL18A1-205ENST00000423214 H0YGN5 161 aa19.74■□□□□ 0.75
COL18A1-205ENST00000423214 IGSF3O75054 1194 aa19.74■□□□□ 0.75
COL18A1-205ENST00000423214 HLA-DOAP06340 250 aa19.74■□□□□ 0.75
COL18A1-205ENST00000423214 ASNSP08243 561 aa19.74■□□□□ 0.75
COL18A1-205ENST00000423214 PXYLP1Q8TE99 480 aa19.74■□□□□ 0.75
COL18A1-205ENST00000423214 U2AF1L4Q8WU68 220 aaKnown RBP19.74■□□□□ 0.75
COL18A1-205ENST00000423214 TLR7Q9NYK1 1049 aaKnown RBP19.74■□□□□ 0.75
COL18A1-205ENST00000423214 DBNLQ9UJU6 430 aaKnown RBP19.74■□□□□ 0.75
COL18A1-205ENST00000423214 FARP2O94887 1054 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-205ENST00000423214 PPP4CP60510 307 aa19.73■□□□□ 0.75
COL18A1-205ENST00000423214 IRX3P78415 501 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-205ENST00000423214 MTMR2Q13614 643 aa19.73■□□□□ 0.75
COL18A1-205ENST00000423214 RRP1BQ14684 758 aaKnown RBP19.73■□□□□ 0.75
COL18A1-205ENST00000423214 ADGRA1Q86SQ6 560 aa19.73■□□□□ 0.75
COL18A1-205ENST00000423214 ASCC2Q9H1I8 757 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-205ENST00000423214 TMOD4Q9NZQ9 345 aa19.73■□□□□ 0.75
COL18A1-205ENST00000423214 COLQQ9Y215 455 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-205ENST00000423214 NOP58Q9Y2X3 529 aaKnown RBP19.73■□□□□ 0.75
COL18A1-205ENST00000423214 IDH1O75874 414 aaKnown RBP19.72■□□□□ 0.75
COL18A1-205ENST00000423214 RLBP1P12271 317 aa19.72■□□□□ 0.75
COL18A1-205ENST00000423214 CYP7A1P22680 504 aa19.72■□□□□ 0.75
COL18A1-205ENST00000423214 SH3D19Q5HYK7 790 aa19.72■□□□□ 0.75
COL18A1-205ENST00000423214 CCDC8Q9H0W5 538 aaPredicted RBP19.72■□□□□ 0.75
COL18A1-205ENST00000423214 PIH1D3Q9NQM4 214 aaKnown RBP19.72■□□□□ 0.75
COL18A1-205ENST00000423214 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
COL18A1-205ENST00000423214 PALD1Q9ULE6 856 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms